Gossypium hirsutum (upland cotton): 107930257
Help
Entry
107930257 CDS
T04793
Name
(RefSeq) RHOMBOID-like protein 3 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107930257
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107930257
Peptidases and inhibitors [BR:
ghi01002
]
Serine peptidases
Family S54: Rhomboid family
107930257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
CcmH
GP41
Motif
Other DBs
NCBI-GeneID:
107930257
NCBI-ProteinID:
XP_016717350
UniProt:
A0A1U8LS18
LinkDB
All DBs
Position
A09:complement(78424415..78427894)
Genome browser
AA seq
337 aa
AA seq
DB search
MAGDDDIESRGGRVKRNGYSNHNTNSSSAYASSSAYVIEDTDSQWTSWLVPMIVVANIAV
FIVVMYVNNCPGHRHMRLVGKCVARFLGRFSFEPLRENPLFGPSSSTLKKLGALEWTEVV
VKHQGWRLITCIWLHAGVIHLLANMLSLAFIGIRLEQQFGFVRVGIIYLLSGFGASVVSS
LFIRNNISVGASGALFGLLGAMLSELITNWTIYTNKAAAFFTLLVIIAINLAIGILPHVD
NFAHIGGFTTGFLLGFVLLSRPQFGWLERQNLPAGTLIKSKYKPYQYVLWLVSLVLLVVG
LTVALVMLFRGENGNDHCRWCRYLSCVSTSRWDCNGI
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggacgatgatatagagagcaggggaggaagggtgaagagaaacgggtatagc
aaccacaatacgaacagtagcagcgcttatgcatcttcttcagcttacgttatagaagat
acagattcgcaatggacatcgtggttggtgcctatgatcgtggtggctaatattgctgtt
tttattgttgttatgtatgtcaacaattgtccggggcacaggcatatgagacttgtcggc
aagtgtgtggccagatttcttgggcgcttttcttttgagcctttgagagagaaccctctc
tttggtccctcttcctccacattgaagaagttgggagctcttgaatggaccgaagttgtg
gttaaacatcaaggatggaggcttattacttgcatttggctgcatgccggtgttattcat
cttctagccaacatgctgagcctggccttcattggtatacgccttgaacaacagtttggg
tttgtgcgggttggaattatttatctcttgtcaggatttggcgcaagtgtggtttcttct
ctatttatccgaaacaacatctctgttggtgcctctggtgctctttttgggcttcttggt
gcaatgctttctgaacttattaccaactggaccatatacacaaacaaggcagcagctttt
tttactcttctggtcatcattgccattaaccttgcaataggaattttgccccatgttgat
aactttgctcatatcggtggcttcacaactgggttcctccttggctttgttctactatct
cgtcctcagtttgggtggttagagcgccagaatcttccagctggtactcttattaagtcc
aagtacaagccttaccaatatgttctgtggttggtttccttggtgctgctagtcgtagga
ttgacagttgcattggtaatgctgtttcggggagaaaatggaaatgatcattgccgttgg
tgtcgctatctatcctgtgtctccacttctagatgggattgcaatgggatctag
DBGET
integrated database retrieval system
