KEGG   Gossypium hirsutum (upland cotton): 107930312
Entry
107930312         CDS       T04793                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 2 isoform X2
  KO
K12191  charged multivesicular body protein 2A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107930312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107930312
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107930312
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    107930312
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107930312
  Exosomal proteins of other body fluids (saliva and urine)
   107930312
  Exosomal proteins of colorectal cancer cells
   107930312
SSDB
Motif
Pfam: Snf7 YlqD GAS Cep57_MT_bd DUF6779 DtrJ-like MerR-DNA-bind
Other DBs
NCBI-GeneID: 107930312
NCBI-ProteinID: XP_016717424
UniProt: A0A1U8LW11
LinkDB
Position
D10:410043..414408
AA seq 219 aa
MLKIFKKKTSPKDALRTSKREMAVATRGVEREIASLQLEEKKLVAEIKKTAKTGNEAATR
ILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPA
KQAKVIKEFQKQSAQMDMTIEMMSEAIDETLDKDEAEEETEELTNQVLDEIGVDIASQLS
SAPKGRIASKNAAPLVNVKSEPTTDVDDLEKRLASLRRL
NT seq 660 nt   +upstreamnt  +downstreamnt
atgttgaagatcttcaagaagaaaacatctcccaaagatgctttgcggacgagcaagaga
gaaatggcggttgcaacacgaggcgttgaacgggagattgcgtctcttcaactggaggaa
aaaaaattggtggcagagattaagaagacggccaaaactggaaatgaggctgctactaga
attttagctcgccaacttgtacgactgcgtcaacagataactaatttgcaggggagtcgt
gcccaaattagaggtgtcgcaactcatacacaggcattatatgccagcacctcgatttct
actggaatgaaaggagcaactaaggcaatggtggcaatgaacaagcaaatggctcctgca
aagcaagcaaaagtaataaaagagttccaaaagcagtcagcacaaatggatatgacgata
gagatgatgtcggaagctattgatgaaactttagataaagatgaggccgaagaggaaacg
gaggagctcaccaaccaggtgcttgatgagattggtgtggatattgcttctcagttatct
tcagctccaaagggtcggattgcatcaaagaatgctgctcccctggttaatgtcaagtct
gagcctaccactgatgttgatgatcttgagaaaagattggcatctctacgacgactttga

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