KEGG   Gossypium hirsutum (upland cotton): 107930371
Entry
107930371         CDS       T04793                                 
Name
(RefSeq) lysine-specific demethylase JMJ18 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    107930371
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107930371
Enzymes [BR:ghi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     107930371
Protein phosphatases and associated proteins [BR:ghi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107930371
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107930371
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel Putative_G5P
Other DBs
NCBI-GeneID: 107930371
NCBI-ProteinID: XP_016717491
UniProt: A0A1U8LSD8
LinkDB
Position
D10:421700..429125
AA seq 1062 aa
MEQLKIATNSHMKEDHSSQLSMKRDNNLESLGSPRHRRVSTRWDPNEPCRPNIDDAPVFY
PTIEEFEDTLAYIEKIRAEAQSFGICRIVPPPSWTPPCPLKEKDIWEHAKFSTRIQQVDL
LQNREPMRKKNRSRKRKRRRHSRMGATRRQANSSSESVVTSETDEKFGFNSGSEFTLEEF
QRYADEFKKMYFQRDCSEDLEPSMIECRKWEPSWEDIEGEYWRIVEQPKDEVEVYYGADL
ETGTFGSGFPKLSSVLTGNDADKYATSGWNLNNFPRLQGSVLSFEGCDISGVLVPWLYVG
MCFSSFCWHVEDHHLYSLNYMHFGDPKIWYGVPGNQATSLEAAMRKHLPDLFEEQPDLLN
ELVTQLSPSVLKAEGVPVYRAVQHSGEFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLEH
GQLAVELYSEQHRKTSLSHDKLLLGSARQAIQALRELHVLGRETPGNSRWKHVCGKDGIL
TKAVRMRKQMEEERVNCLPPDMPVRKMEKDFDLESERECFSCFYDLHLSACSCKCSPERF
ACLKHVKNFCSCQDEDRFVLLRYTVDELQMLVEALEGGLDAVKLWASKDLGLVSGIDCDV
YLSKWVQDSEVLKFEPARESFSCSSRVEEKVDINTPYLYGHFSSEVSPSECQPATKLKAS
HVTLDGHNNVVNVGVLVMENRTNSEQEACIDLNLDIVSDYPATARKSICDSDSSSNHSVT
DVETFLREKSCGFDEVREPVLKRLKSDCSSSVSREYSEKYQHSISTGHRGPDGFEGKKLF
GVELQFPHINAGQSNTLLKAETLNCSDVIASMAHQGHPLLNHAVEPLNFGSVIFGKLWCN
SQAIFPKGFRSRVKYFSVLDPTKISSYISEVLDIGLLGPLFKVTLEGCPTITFSNVLPNK
CWEMVLQQLNQEILRRKNLGESGLLPLQSLQSINGLQMFGFLSPSIIQAIEALDPNHQCS
EYWNNKTTRDINEVKKYALGLSCSVGESKAKIFGVDLTKQDHEDPNQHSVDEEIQVVLRG
LFKKASPEELKIMRRILCSDSRSPERRVAYETLTEEIRKTCR
NT seq 3189 nt   +upstreamnt  +downstreamnt
atggaacagttgaaaattgcaacaaattctcatatgaaagaggatcattcttcacaactt
tccatgaaaagagataataatcttgagtctttgggcagtcctcggcatcgaagggtgtca
acaagatgggatccaaatgaaccatgccggcctaacattgatgatgccccagtgttttat
ccaactattgaggagtttgaagatacacttgcttacatagaaaaaattcgtgctgaagct
caatcatttggtatatgtcggattgttccgccaccttcctggactccaccttgtcctctt
aaagagaaagatatatgggaacatgctaaattttctactagaattcagcaagttgattta
cttcaaaatagggagccaatgagaaagaaaaatagaagccggaaacggaaacggaggagg
cattcaagaatgggagctactagaagacaagccaattctagttcagaatctgttgttact
tctgagactgatgagaagtttggctttaattcaggatctgaattcactcttgaagaattt
cagagatatgcagatgaatttaagaagatgtactttcaaagggactgtagtgaagattta
gagcccagtatgattgaatgtaggaaatgggaaccgtcttgggaggacatagagggtgaa
tactggaggatagttgagcagccaaaagatgaggttgaggtatattatggagctgacttg
gaaacaggaacatttggcagtggctttcctaagttgtcttctgtgttgactggaaatgat
gcagataaatatgcaacgtcaggttggaacctaaataatttcccacgcctacaaggttca
gtgttatcttttgaaggatgcgatatatctggagttctagtgccatggctctatgtgggg
atgtgcttctcatcattttgttggcatgttgaggaccaccatctgtattcgctaaactat
atgcactttggtgatccaaaaatatggtatggagtgccagggaaccaggctacctctttg
gaggctgcaatgagaaagcatctgcctgatttgtttgaagaacaacctgacctactcaat
gaattggttactcaactgtctccttcagttctgaaagctgagggtgtaccagtctatcgg
gccgtacaacattctggggagtttgttcttacctttccaagggcatatcatgctggattt
aattgtggcttcaactgtgcagaggcagtgaatgttgctcctgttgattggctagaacat
ggtcaacttgcagttgagctctacagtgagcagcatcgcaagacatcactgtcccatgac
aagctactcctgggatcagctcggcaagccatccaagctctcagggagttacatgttctt
ggcagagaaacaccgggaaattcaaggtggaaacatgtatgtgggaaggatgggatactt
acgaaggcagttaggatgagaaagcagatggaagaggaacgagtaaattgccttccccct
gatatgcctgtacgaaagatggaaaaagactttgatctggaaagtgagagggaatgtttc
tcttgtttctatgacttgcatctatctgcctgcagctgcaaatgctctcctgaacgattt
gcttgtctgaaacatgtaaagaatttctgctcgtgccaggatgaagacagatttgtcctc
cttcgctacaccgttgatgaattgcaaatgctagttgaagccctagagggaggattagat
gctgttaaactatgggcatccaaagatctcgggttggtttctggtattgattgcgatgtt
tatttatctaagtgggttcaggacagtgaggtattaaaatttgagcctgctcgggaaagt
ttctcttgttcctcaagagtggaagaaaaggtggatattaatactccttacttgtatggt
catttttcttcggaggtatcgccatcagagtgccagcctgcgactaaattaaaagcctct
catgtcaccttggatggtcataataacgtcgtaaatgttggagttcttgtcatggaaaac
agaacgaactcggagcaggaagcctgcattgacttaaatcttgatattgtatctgattat
cctgcaactgcaaggaagtctatttgtgattctgatagctccagtaaccacagtgtaact
gatgttgagacatttttgcgagagaaaagttgtggatttgatgaagtaagagaacctgtt
ctaaagagactcaagagtgattgtagctcatcagtttctcgagaatattccgagaagtat
cagcattcaatttcaacaggtcatcggggtcctgacggctttgagggcaagaaattgttc
ggcgttgaacttcagtttccgcatatcaatgcaggacaatcaaataccttgttgaaggca
gaaactctcaactgctcagatgtaattgcgtctatggctcaccaaggtcatccattgttg
aatcatgctgttgagcctttaaattttggatctgtaatttttggaaaactatggtgcaac
agccaggccatattcccaaaaggttttagaagccgtgtcaagtactttagtgtgctcgac
ccaacaaagatttctagttacatttctgaagtcttggatattgggctacttggacctcta
tttaaggttactttagaaggctgccctaccataaccttctcgaatgtgttgcctaacaaa
tgttgggaaatggtgctacagcaattaaatcaagaaatcttgaggaggaaaaacctagga
gaaagtgggctgctacctttgcaatctctgcagagcatcaacgggctccaaatgtttgga
tttctctcaccatccataattcaggcaattgaagctctcgatccaaatcatcaatgttcg
gagtactggaataacaagactactcgtgatatcaatgaagtcaaaaagtacgcgcttgga
ttgagttgctcggtaggcgaatcgaaagcaaaaatttttggtgtcgatttgacaaagcaa
gatcatgaagatcccaatcaacattctgttgatgaagaaatacaggtagtcctaagagga
cttttcaagaaggcaagtcctgaagagttgaaaataatgcgcaggatactctgcagcgac
tcacgaagtcctgaacggcgagtggcatatgaaacattgaccgaggagatccgcaaaaca
tgtcgataa

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