Gossypium hirsutum (upland cotton): 107930379
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Entry
107930379 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X2
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107930379
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107930379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
107930379
NCBI-ProteinID:
XP_016717506
UniProt:
A0A1U8LSF1
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Position
D10:144702..151195
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AA seq
650 aa
AA seq
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MAATSDRTPEEQCADPESVKEQVTPLSTKNEMSVSPNSSHDTAPIGHPRDSTGQSGSSGD
RNVYSPTIYAPQAQSFYYRGYDNAAGEWDEYPPYVNADGLELGSMGVYNDNPSLVFHPGY
GYNPQMPYGPYSPVTTPLPSVGGDAQLYSPQQFPFSGPPYYQQLVPPSLPYISSPTTVSQ
PELTTLASIDQQGDNMLFGPRPSYNTPLGSFGRGSFPGNHGNLGFNDSQQGFDGLRSGGL
WSDWSKPSDRQRSLTPISPAVSPQPFGPIGQNVPMASQQQRLFYQLGSGVTSYNRGFMQS
DLNQDPRFGSASIPNSGANSRGWLSLDSNKRRGRGSGVPLCGCNGALDILSEQNRGPRAS
KPKNQITAEHSSSIDDSKNNKSLSKINDESYNRPDFSTDYKNAKFFIIKSYSEDNVHKSI
KYGVWASTPNGNKKLDAAYREAKENQDPCPVFLFFSVNASAQFCGVAEMVGPVDFDKSVD
YWQQDKWSGQFPVKWHFIKDVPNSQFRHIILENNDNKPVTNSRDTQEVRLEQGIEMLNIF
KSFETDTSILDDFDFYEDRQKAMQERKARQQASLMSVGVVGETEHRNTVSLSNDFMKQMS
KSFAQVVCLDDGNKDGTAIERTSSASDGSKVARVKLEDAMTAAVSSGQAS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacgtcagatcgtacccctgaagagcaatgtgctgatcctgaaagcgtgaag
gagcaggtaactccactttcaacaaaaaatgagatgtctgtttctcctaactcctcccat
gatactgccccaataggtcatccgagggatagcactggtcaatctggttcaagtggagat
cgtaatgtctactcacctacaatatatgcccctcaggcacagtctttctactacagaggg
tatgacaatgccgctggtgaatgggatgagtatccaccatatgtaaatgctgatggccta
gaacttggatctatgggtgtctacaatgacaatccatcgctagtcttccaccctggatat
ggttacaatccgcaaatgccatatggaccatattccccagtcactacacctttgccttct
gtaggtggtgatgcacagttgtactctcctcagcaattcccattctcagggccaccatat
tatcagcagttagttcctccaagtttgccttatattagttcacctactacagtttcacaa
ccagagctaaccaccttagctagcattgaccaacaaggtgataacatgctttttggacca
aggcccagttataacactccattgggttctttcggtagaggcagtttccccggaaatcat
ggtaacctaggatttaatgattcacagcaaggttttgatggattgaggtctggaggactt
tggtcagattggtctaagccttctgacagacagagatctttgactcccatatctccagca
gtatctccccagccatttgggccaattgggcagaatgttccaatggcatctcagcagcaa
aggttattttatcagttaggatccggtgtgacctcctataacagaggtttcatgcaaagt
gacctcaaccaagatccccgttttggaagtgcatcaattcctaattcgggtgcaaacagt
aggggctggctatcacttgatagtaacaaacggcgtggaaggggcagtggtgtcccccta
tgtgggtgtaacggtgctcttgatatccttagtgagcaaaaccgaggaccaagggcctca
aaacccaagaatcaaatcacagctgaacatagttcttccattgatgatagtaaaaacaac
aaatctttatccaagatcaatgatgagtcatacaacaggccagatttctcaactgattac
aagaatgctaagttctttataatcaagtcatacagtgaagataatgttcacaaaagtata
aaatatggtgtgtgggctagcacacctaatggtaacaaaaagttggatgctgcatatcgt
gaggccaaggagaaccaagatccttgccctgtctttctcttcttttcggtaaatgctagc
gctcagttctgtggggttgctgaaatggttggacctgttgattttgacaagagtgttgat
tactggcagcaagataaatggagcgggcagttccctgttaaatggcattttatcaaagat
gttccaaacagtcagttccgtcacatcatactggaaaataatgataataagccagtaact
aacagtagagacactcaggaggtgagactggagcaaggaattgagatgttgaacatcttt
aaaagttttgaaactgatacatcaatcctggatgattttgacttctacgaggacaggcag
aaagcaatgcaggagcgtaaggctagacaacaagctagtctcatgtctgtcggggttgta
ggagaaactgagcatagaaataccgtctctctatccaacgacttcatgaagcagatgtca
aagagctttgctcaagttgtgtgcttggatgatggcaataaagatggcaccgccattgag
agaacaagttctgcttctgatggttcgaaagttgcaagggttaaacttgaagatgctatg
acggcagctgtctcttctggtcaggcaagttaa
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