Gossypium hirsutum (upland cotton): 107930589
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Entry
107930589 CDS
T04793
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107930589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107930589
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107930589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
107930589
NCBI-ProteinID:
XP_016717743
UniProt:
A0A1U8LWE0
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Position
A06:2805520..2807832
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AA seq
393 aa
AA seq
DB search
MESDQAKLFVGGISRETSEAILTDHFSKYGNVVSSVVAKDKNTKSPRGFGFVLFSEPSSA
DKALQATHVILGRTVEVKKAIPRSEQNQIQRQQHHNSNEQPSRNGGSEPVDSNNHFRTKK
IFVGGLSASLTEEEFKNYFERFGRITDVVVMHDSLTNRPRGFGFVTFESEEAVENVMQKS
FHELSNRLVEVKRAVPKEGNNGGNNGYNMKAGVVPVSPYNGFQPFDYVPGSPGYGMFPGY
APLIGYNTIDGYVYGSGVYGNGYPTVGYGRIGYGVPPVTPRGSFYAPVMLGPRLCPPPYG
TASAYPPCMNNGVGLVGTVTGGFNGITGNAVDGKSNQVNDDSRDPPTNAMPPQTEGANYD
GEGLKECNAGASSEQDQKHHDGELEPLYVDASR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgatcaagccaaactgtttgtgggagggatatctcgggagacaagtgaagct
attctcacggatcatttcagcaaatacggcaacgtcgttagctctgtcgtagctaaagac
aagaacaccaaaagccctcgtggtttcggctttgtgttgttctctgaaccttcttcagct
gataaagctcttcaagctacccatgtaattcttggtagaacggtagaagtgaaaaaggca
ataccccgaagcgaacaaaaccaaattcagcgacaacagcaccacaattcgaatgaacag
ccgagtaggaatggtggtagtgaacctgttgatagcaataatcactttaggactaaaaag
atcttcgtagggggtttatccgctagtctaaccgaggaagagtttaagaattactttgaa
agattcggtagaataaccgacgtagttgtgatgcatgacagcttgactaacaggcctaga
ggattcgggtttgttactttcgaatcggaagaggctgtggagaatgttatgcagaagagt
tttcatgagttgagtaataggcttgtggaagtcaaacgtgcagtgccaaaagaagggaat
aatggtggtaacaatggttataacatgaaggctggtgttgtaccggtatcaccatataat
ggttttcagccttttgattacgttcccggtagtcctggatatggtatgttccctggttat
gctcctcttattgggtataataccattgatggatatgtttacggaagtggtgtttatggc
aatgggtacccaaccgttggatatggtaggataggttatggtgtccctccagttactccg
aggggttctttttatgcccctgtaatgcttggaccaagactttgcccgccaccttatgga
actgcatctgcctatcccccttgcatgaacaatggggttggtctagtgggtacagtgact
ggtgggttcaatgggattactgggaacgcagttgatggaaaatcaaatcaagttaatgat
gactctcgagatccacctacaaatgccatgccacctcagaccgaaggagcaaactatgat
ggtgagggtttaaaggaatgcaacgccggtgcttctagcgaacaggatcagaaacatcat
gacggagaacttgagcctttatatgttgatgcttcaagatga
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