Gossypium hirsutum (upland cotton): 107930841
Help
Entry
107930841 CDS
T04793
Name
(RefSeq) autophagy-related protein 13b-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107930841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107930841
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107930841
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107930841
Atg1 complex
107930841
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107930841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107930841
NCBI-ProteinID:
XP_040964021
UniProt:
A0ABM3BAE0
LinkDB
All DBs
Position
D12:complement(227457..232393)
Genome browser
AA seq
638 aa
AA seq
DB search
MTSTHTNSHTEAAKMEQVITEFFYKSLLIILESRSSYVSSRNYSGEQTVSSPSSSSSSSS
SVRPRDKWFNLALRECPSALENLDLCRRSNFEPVVVDVILEQKPLDWGPASFSPTSDLVR
NLSSKNKNSYFWNSDQQDESGSEMKCEKIIERWFVQHESRKGRDCNSGNRRSSCNNLSAL
YKKLILMLRSLYVTVRLLPAYNIFRDLNSSGLICSFKLVPRVSSFVEPLTRKEEVDMQRF
WFTPVDTSCGRLCLSVLYHSSISDMSSESSTPMSPQFIPDYVGSPLADPLRRFPSLPVSH
GSPSSLPFSRRHSWSYDHYKASPPLVSFSPSPTHSESNALVSNPSSLGLPPMSLPPHPPE
TSLAHKRNTNFDEYCPSPNFSASPSPSPSPSLPIYIPRTHLSKALLRSESAPVNIAAPKL
ANTPALSGKQNLPPCPPLKITRAGTSRTDNIRVPAETDATIEKIFSFGKEDCWKYSGVKA
FSNSSPRISCSRSSSRSLQDDFDYSEFPCPFDVEDGEMMDPGSRKSQDAAVGALVRLLKN
SPPLRQNVSLNFSEASRPEILSNSIPKQSQILEAVTVEYAAAPNIASFRLVASKTTTDAL
EELRGYKVMKNLLLSEGGKAYTSNVASAAEHSSTSKGT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaactcacacaaattctcacactgaagctgccaaaatggaacaagttatcact
gaattcttctataagagtcttctaataatacttgaatcgaggtcttcttatgtatcatca
cgtaattatagtggtgaacaaactgtgtcatctccatcttcatcctcatcatcttcatct
agtgtgagaccaagagataaatggttcaatttagctcttagggagtgcccttcagcgcta
gaaaatcttgacctttgtcgacggagtaattttgagccggttgttgtcgatgttatattg
gagcagaaaccacttgattggggacctgcaagcttttcccccacaagtgatcttgttagg
aatttgtcatctaaaaataagaattcatatttctggaattctgatcaacaagatgaatca
ggcagtgagatgaaatgtgaaaaaatcatagaaagatggttcgtgcagcatgaaagtaga
aagggtagggattgtaattcagggaatagaaggtcaagttgtaataacttgagcgcatta
tataagaaattgatattgatgttgaggtccttatacgtgactgtcaggcttttacctgca
tacaacatttttcgtgatctgaattcatctggtctaatttgttcctttaagcttgttcct
agggtatcttcttttgttgaacccttgactcgtaaagaagaggtagatatgcagagattt
tggtttacccctgtggacacttcttgcggaaggctttgcctttcagttttgtaccattca
tcaatctcagatatgagctctgaatcatcaacccctatgtctcctcaatttataccagat
tatgttggaagcccattggcagaccccctgaggagatttccttctcttcctgtatcacat
ggctctccatcatctttaccattctcaagaagacatagttggagttatgaccattacaag
gcctcaccacctctggtttctttctcaccatcaccaacgcattcagaatcaaatgctttg
gtttctaacccaagctcccttggtttgccacctatgagcttacctcctcatcctcctgaa
acatcactagctcataagaggaatacaaactttgatgagtattgtccttcccccaatttc
tctgcttccccttccccctctccctcaccatcactccccatctacattcctaggactcat
ttgtcaaaagctcttttacgctctgaaagtgctcctgttaacatagcggctcccaagctt
gctaatacccctgcattgtctggtaagcagaatttgccaccgtgtcctccccttaaaatt
acaagagctggtacttctaggactgataatattagggttcctgctgaaactgatgctact
attgagaagatattttctttcgggaaagaagactgctggaaatactctggagtgaaagct
ttttccaacagctcaccacgaatttcatgttctagaagttccagtaggtctttacaagat
gattttgactactctgagtttccttgtccatttgatgtggaggatggtgaaatgatggac
cctggtagcagaaaatcccaggatgctgctgttggtgctcttgtccgattgctgaaaaat
tcccctcctcttcgccaaaacgtctcccttaatttttcagaagcctcaagaccggaaatc
ttgagcaacagcatcccaaagcaaagtcagatcttggaagctgtgactgttgaatatgct
gctgctccgaatatagcatcttttaggcttgttgcatcaaagacaacaaccgatgcatta
gaggaacttcggggttacaaagtgatgaaaaacttgttgcttagtgaagggggtaaggct
tacacatctaatgttgcctctgcagctgaacattccagtaccagcaaaggtacatga
DBGET
integrated database retrieval system
