Gossypium hirsutum (upland cotton): 107931029
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Entry
107931029 CDS
T04793
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107931029
03036 Chromosome and associated proteins [BR:
ghi03036
]
107931029
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107931029
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Helicases
107931029
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107931029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107931029
NCBI-ProteinID:
XP_016718289
UniProt:
A0A1U8LYF7
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All DBs
Position
A12:complement(108002659..108007966)
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AA seq
710 aa
AA seq
DB search
MPSLALSDHKHKKEDKKMKNKLALKNPETDKKVKKLKDPKVKEDENDLEVKKSKKKRKAS
ELQLEEDERSETSSEIVEPVDVKVKVKVKVTEKKKKKNKEKLEKDDEDEGKSEDPNLVSR
FRISEAVRKKLKSKGIESLFPIQALTFDVILDGTDLVGRARTGQGKTLAFVLPILESLTN
GTLKASRKNGYGRAPSVLVLLPTRELAKQVFEDFEVYGEVVGLTSCCLYGGAPYHTQEMK
MKKGVDIVIGTPGRIKDHIERGNIHLGSLKFRVLDEADEMLRMGFVDDVELILGKVKDAS
MVQTLLFSATLPDWVKGIAARFLKTSKKTVDLVGKEKMKASTSVKHIVLPCSKSARSQLI
PDIIRCYSSSGRTIIFTETKDSASELAGLLPGSRALHGDIQQAQREVTLNGFRSGKFMTL
VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKRSSISKI
ERESGVKFEHISAPQPVDVAKSAGVEAAKIIAEVSDSVIPAFKSIAQELLETSGLSAEDL
LAKALAKAAGYSEIKSRSLLTSMENHVTLLLEAGKPIYTLSFVFGVLKRFLPEEKVQSVQ
GLTLTADGMGAVFDVAEDDVGTFLAGAENANNVRLETLKKKLPRLQERDQSRGRFGGAGG
GGGRGDRSGGGGSGGGGKFSGGRSGRGGFSDRVNDRFSRGGRGRYNSKKW
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccttcattagctttatccgatcataaacacaagaaagaagataaaaagatgaagaat
aaactcgctttaaaaaatccagaaaccgataagaaagtgaagaaactgaaggatccaaag
gttaaagaagatgaaaacgatttggaggtaaagaagagtaagaagaaacggaaggcatcg
gagcttcagttagaagaggacgaaaggagcgagacgagctcggagatcgtcgagccggta
gatgtgaaggtgaaggtaaaagtgaaagtgacagagaagaagaaaaagaaaaacaaagag
aaattggagaaggatgacgaggatgaaggtaaaagtgaggatccgaatttggtatcgagg
tttcggatctcggaagcagttaggaagaaacttaaatcgaaggggattgaatccttgttt
cctattcaggccttgacatttgatgttattcttgatggcactgatttggttggccgtgct
cgtaccggtcagggtaagacactggcctttgtgttgccaatattggagtctttaaccaac
gggactttaaaagcatcaaggaagaatggatatggcagggcaccaagtgttctggtactt
ttaccaactagggaactggctaaacaggttttcgaggactttgaagtttatggcgaggtg
gtggggttgacatcatgttgtttatatggaggagctccctaccacacccaagagatgaaa
atgaagaaaggagtggatatagttatcgggacacccggccgcataaaggatcacatagag
agggggaatattcacttaggttcattgaaatttcgagttcttgatgaggcggatgaaatg
ctgagaatgggatttgttgatgacgtggaacttatattaggcaaggtaaaggatgcaagt
atggttcagacacttctttttagtgccaccttgccagactgggtgaagggtattgcagca
agatttcttaaaacaagtaagaagactgttgatcttgttggtaaagagaagatgaaggct
agtaccagtgttaagcatattgtcttaccctgttctaagtctgcaagatcacagttgatc
ccagatattattcgttgttatagcagcagtggacgtactattatattcactgagacaaaa
gattctgcttcggagctggctggcttattgcctggatcccgagctttgcatggggacata
cagcaagcgcaacgtgaggtaaccttaaatgggtttcggtcaggcaagttcatgacatta
gtcgctacaaatgtggcggcaagaggattagatatcaatgatgtgcagttaattatccag
tgtgagccaccgcgtgatgtagaagcatatattcatcggtctggacgaacagggagagca
ggcaatactggagttgctgtcatgctttatgatcctaaaaggtcaagcatatctaagata
gaaagagaatctggagtgaaatttgagcacatatctgctcctcagccagttgatgttgct
aaatctgctggtgtagaagcggccaaaataatagccgaagtctctgacagcgtaattcct
gccttcaagtccattgctcaggagctattagagacttctggtttatcagcggaagatcta
cttgccaaagcactagccaaggccgcaggttattctgaaataaagagtagatcccttcta
acatctatggagaaccatgttacattacttcttgaagctggaaaacctatttacacactt
tcatttgtttttggtgtgttgaaaagattcttgcctgaggaaaaggttcagtcagtgcag
ggactgacccttactgctgatggaatgggtgcagtatttgatgttgcagaagatgatgtc
ggaacatttctggctggggctgaaaatgcaaataatgttagattagagacgttgaagaaa
aaattgccacgtttacaagaaagagaccagtcaagagggagattcggtggtgctggtggt
ggtggtggaagaggtgatagaagcggcggcggcggaagtggtggtggtggtaagttctct
ggcggcagaagtggccgaggcgggttttctgatagagtaaacgatcggttttcgcgtggt
gggcgaggtcgctacaatagcaagaaatggtga
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