Gossypium hirsutum (upland cotton): 107931040
Help
Entry
107931040 CDS
T04793
Name
(RefSeq) protein SDA1 homolog isoform X1
KO
K14856
protein SDA1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107931040
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107931040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
107931040
NCBI-ProteinID:
XP_016718303
UniProt:
A0A1U8LY21
LinkDB
All DBs
Position
A12:108543408..108548875
Genome browser
AA seq
809 aa
AA seq
DB search
MVSMVSGSAEPLSASGRSSEKLSLPSLQSKMKTDPEGYETELHLIRNQFYSALELFQQQA
ALNFSSISGVGADPTVAKDLSDRAMFLAHVTPFYPKQLAEFPSDLAAFLKSSARTLPSGL
RFHATQAVILLVNRKIIDIKDTLSLFMELQTLDDRNLRKLAFSHVVHSIRRMNKNHKNEA
KNRSLQNILFGLLQQDDEAKAKRSLITLCELHRRKVWFDERTANAICMACFHSSSRIMIA
VLSFLLDYEKIENDDEDSDDLSSEDEMTQNPHVVISKETVYKAHHKGTAASKKKKKAKLQ
RAIRSMKRQQRLSSESSNCSYYSPLYHLKDAQGFVEKLFSRLQTCNERFEVKMMMLKVIA
RTVGLHRLILLNFYPFLQRYVQPHQKDITNLLAAAVQACHDMVPPDAVEPLFKQIVNQFV
HDRSRPEAIAVGLNVIREICLRMPLLMTEDLLQDLVLYKKSHEKAVSAAARSLITLFREV
CPSLLVKKDRGRPMDPKAKPKSYGEVNVLSNVPDIELLEQDDDIGGSEDDESGDEAVSIS
SDDGNEDNDDEESQYTANDGSEDEDVLDEEGDENDSVDEYESDIDDANEDDSDDEDKGDT
EELETEEDDYTEEVSGSSKAGDSAGDGGNEDQKTKASKRKLSDFEGQLIAADTSLRALKR
LAEAKTSHASSDSVDGILSDEHFQRIKKLKAKKEAKTALAQQGFKIPSSDQLSFKRVDPS
KLEAHVRLRLSKEERLALVKAGREDRGQYQARTAIKQKKTGGLSNRQKDHKKYMPLAAKK
AKAQRSRQEKNKKKSRSGKQFRGKKAWKQ
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatggtcagtggctcagcggagcctctctctgcatcgggtcggagctcagag
aagctgagcctcccatccctccaatccaaaatgaaaactgatccggaaggctatgaaacg
gagctccatctcatccgcaatcaattctattccgctcttgagctatttcaacagcaagcg
gctctgaatttctcctccatcagtggcgtcggtgctgacccaactgtggctaaggacctc
agtgaccgtgccatgttcttggcccatgtcacgccgttctatcccaagcagctcgctgag
ttcccttccgatctcgcagcgtttctgaaatcatctgcaaggactcttccgtcagggctt
agattccatgccactcaagccgtcattctcctcgttaaccggaagattattgatataaag
gacactttatcgttgttcatggaattgcagacactagatgataggaatttgaggaaatta
gcattttctcatgttgttcatagcattagaagaatgaacaagaatcataagaatgaggcc
aagaatcgctcccttcagaatatcttgtttggcttattgcagcaagatgatgaagcaaaa
gcgaaaaggtctctaattactttatgtgaacttcatcgaagaaaggtttggtttgatgaa
aggacagcaaatgcaatttgtatggcatgttttcattcatcttctagaataatgattgct
gtgctctcttttctccttgattatgagaagattgaaaatgatgatgaggattcagatgat
ttaagtagtgaagatgaaatgacacaaaatccccacgttgttatcagcaaagagacagtt
tacaaggcacaccataagggtacagctgctagcaagaagaaaaagaaagcgaaactacag
cgtgctattcgtagcatgaaaaggcagcaacgcctgtcatcagaaagtagcaattgtagt
tattattcacccctttatcatctgaaagatgcacagggatttgtagaaaagcttttttct
cgccttcaaacctgcaatgaacgatttgaggttaaaatgatgatgttgaaagtaattgct
agaacagttggccttcaccgtctgatattattaaatttctacccttttcttcaaagatat
gttcagcctcatcagaaagatatcactaatttacttgcagcagcggttcaggcctgccac
gatatggttcctcctgatgcagttgagccattgttcaaacaaatagtaaaccaatttgtt
catgatcgttcacgcccagaggccattgctgttggactgaatgtgataagggaaatatgc
ctgcgcatgcctttgttgatgactgaagatttgctacaagatctcgtattgtataaaaag
tcacatgagaaggcagtttcagctgcagctcgctcgctcattactttgtttagagaggtt
tgcccatcactgctggttaagaaggaccgaggccgtccaatggaccctaaggcaaaacca
aagtcatatggagaagtcaatgtccttagcaatgtccctgacattgaactattggaacaa
gacgatgacattggtggcagtgaggatgatgaaagtggagatgaggctgtatctattagt
tctgatgatggcaatgaagacaatgatgatgaagaaagccagtatactgcaaatgatggg
agtgaggatgaagatgtattggatgaagaaggtgatgagaatgacagtgttgatgaatac
gagagtgacattgatgatgccaatgaggatgacagtgatgatgaggataagggcgataca
gaggagttggaaactgaagaggatgattatactgaagaagttagtggttcttctaaagca
ggtgacagtgctggagatggtggaaatgaagatcaaaagaccaaggcaagtaagagaaaa
ttgtctgatttcgagggtcaacttattgctgctgatacaagtcttcgagctttaaaaagg
ttggcagaggcaaagacgagccatgcttcatcagactcagtggatggtattctctctgat
gagcatttccaaaggatcaagaaactaaaggctaagaaggaagcaaaaactgctttggct
caacaagggtttaagattccaagttctgatcaactaagtttcaaacgagtagatccctca
aagcttgaagcccatgtccgactcaggcttagcaaggaggaaaggctagcattggtaaaa
gcaggcagggaagacagagggcagtaccaggctcgaactgccatcaaacagaaaaagact
ggtggtttaagcaaccgtcagaaagatcacaagaagtatatgccgcttgctgcgaagaaa
gccaaagctcaaagatctcgacaagagaaaaataagaagaagtcacgttctggcaaacag
ttccgtgggaagaaagcttggaagcaatga
DBGET
integrated database retrieval system
