Gossypium hirsutum (upland cotton): 107931114
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Entry
107931114 CDS
T04793
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107931114
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
107931114
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
107931114
NCBI-ProteinID:
XP_040965606
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Position
D13:complement(64625579..64631251)
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AA seq
738 aa
AA seq
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MADVINMPADSLDDRRGGGDRKDNDNNNNNNRQPPSSDYPNSSPPSPPPPRRRERDSRER
RDRDFYDRNRSPPPPLTRERDYKRRNSISPPPPPFYRDRRHSPPPRRSPPYKRSRREDGG
YRGRRGSPRGGFGPGDRRFGYDYGGGYDREMMGRTGHPEERPHGRYFGRSTGGYQDWDSG
RGGYIDASSSGSTQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAFFDAH
KNEDWLKDKYHPTNLVTVIERRNELARKVAKDFLLDLQSGTLDLNPAVNSLSSKKSEQTS
DPNSEDEADIGGKRKRNAREPTKETDLSTAPKAHPISSDPRRISIDIEQAQSLMRKLDSE
KGINENILSGPDNQITRDKSHGNSTGPVIIVRGLTSVKGLEGVELLDTLITYLWRVHGLD
YYGLIETGEAKGLRHVREEGKGSDVTINGSEWEKNLDTHWQERLKGQDPLELMTAKEKLD
AAAVEALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMELTSKVR
EELYFQNYMNDPGAPGGTPVMQQSVPKDKPLRRKMLENRLKDERGSRRERDNRANGSDRY
DRSENPQSSSFPSNNDGPEGGNRDDLMFESFGGQGMHVATPFSSDMAPPPVLMPVPGAGP
LGPFVPAPPELAMQVFREQGGPLPFEGNSRSGRPGPNLSGPAPFLLPPGFRQDPRRLRSY
QDLDAPEDEVTVIDYRSL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcataaacatgccggctgattccctcgacgaccgccgtggcggcggcgac
cgtaaagacaatgataacaacaataataataacagacagcctccgtcatctgactatccg
aactcctctccgccatcgccgcctccgcctcgacgccgagaacgagactctcgtgagcgg
cgggaccgcgacttctacgatcgcaaccgctctcctccacctccacttaccagggagaga
gattacaagcgacgcaatagtattagccctcctcctccgccgttttacagggataggaga
cactcgcctccgccgcggaggtcaccaccttataagaggtctaggcgggaggacggaggc
tacagagggaggagagggagccctagaggaggatttggacctggagatagaaggtttggg
tatgactatggtggtggatacgatcgcgagatgatgggaaggaccggtcaccctgaagaa
aggcctcatggccgatacttcggtcgctcaactggtggctatcaagattgggattctggc
cgaggtggttacattgatgcttccagttcggggagtacacaaagagaaggattgatgtca
tacaagcaattcattcaagagcttgaggatgatatactaccagctgaagctgagcgcagg
tatcaagaatacaagtcagagtatatatctacccagaaacgagccttttttgatgctcac
aaaaatgaggactggttgaaagacaaatatcatccaacaaacttagtcactgttattgaa
aggagaaatgagcttgcgcgtaaagttgccaaggactttttgcttgatctgcagagtgga
acattggacttaaatcctgctgtcaattctttgtcatcaaagaaatcagaacagaccagc
gatcctaattctgaagatgaagcagacattggtggcaaaagaaagcgaaacgctagggaa
cctactaaagaaactgatctttccacagctccgaaggctcaccccataagttctgatccc
agaagaatttcgattgatattgaacaagcacagagcctaatgcgtaaactggactctgaa
aaaggaatcaatgaaaatattcttagtggacctgacaaccaaataactagagataaatct
catggtaattcgactggccctgtgattattgtacgtggcttgacttctgtgaaaggcttg
gaaggtgttgagcttctggatactcttataacttacttgtggcgtgtccatggcttggat
tattatggactgattgaaacgggcgaagccaagggacttaggcatgtgagagaagaggga
aagggttctgatgtgactatcaatggatctgagtgggagaaaaaccttgacacacactgg
caagagaggttgaagggtcaagatcctttagaattaatgacggctaaggagaaactagat
gctgctgctgttgaagctttggatccttttgtccggaaaatcagggatgaaaagtatggt
tggaagtatggttgtggtgccaagggttgcacaaagctctttcatgctgcagagttcgtg
cacaagcatcttaaactcaaacatccggagcttgtgatggagctaacgtctaaagtgcgt
gaagagctttatttccagaactacatgaatgatccaggtgcacctggtgggacacctgtt
atgcaacaatctgtaccgaaagacaagcctctgagacgtaaaatgttggaaaaccgcttg
aaagatgagcgtggctcacgtagagaacgtgataatcgagcaaatggaagtgatagatat
gataggtctgagaaccctcaatcaagttcttttccatccaacaacgatggtcctgaaggg
gggaaccgtgatgatctaatgtttgagtcatttggtggacaagggatgcatgttgcaact
ccattttcttcagatatggcacctccaccagtcttgatgcctgttcccggtgctggtcca
ttgggaccttttgttccagctccacctgaactcgcaatgcaggtgttcagagagcagggt
ggtccgcttcctttcgaaggcaatagtagaagtggacgtcctggacctaatttaagtgga
cctgccccatttcttttgcctcctggcttccgtcaggatcctcggcgtttacgaagttat
caagacctagacgcacccgaagacgaagtaacagtcatagactaccggagcttgtag
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