Gossypium hirsutum (upland cotton): 107931126
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Entry
107931126 CDS
T04793
Name
(RefSeq) peroxisome biogenesis protein 5 isoform X4
KO
K13342
peroxin-5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107931126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107931126
Membrane trafficking [BR:
ghi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107931126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_17
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_19
TPR_14
TPR_7
TPR_9
TPR_12
PPTA
TPR_20
NGF
TPR_10
TPR_Slam
DUF1543
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
107931126
NCBI-ProteinID:
XP_016718392
UniProt:
A0A1U8LV47
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Position
A04:complement(3747..11586)
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AA seq
740 aa
AA seq
DB search
MSMRELVTGGAACAVPGSSSSSSNPVGAFANALIGSSSKTQGVLKEIPNAAAASPHAQFY
PHADDPVAALPGSELDRPFLQSNPQGSEFIRGFRTADANGLADAWEEIQRQPHFDRVYEG
ATPAPPIQPSLDGPPQRVLSSFLHSFVDSSRSGIPLHPTPLPLLGLSQGDKQCIRDRSSI
MARHIFADKSEEFINAQVNALLSSLEIENDIHARGPMPGRFRELEDYWNESQGVLKPGAH
AADGWVTEFSQNRPHHGDLEAWAHSFEQKHGAGGWASEFEQEQAQLTSVDQMRGGNIESL
AAIQQTRMLAHTLSQNSDPKFQNSKFLQFVSKMSRGELIIDDNQVKPASENWATEYQQQY
NGGASWADEFVHDEVFRGPDHWANEFGAERLQQESVDDQWVNEFSKLHVDDWAEEFGRQV
GEGALGDSSSDNWANSYDEFLNEQLAAKQRSDASRGVYVFSDMNPYVGHQNPLKEGQELF
RKGLLSEAVLALEAEVMKNPENAEGWRLLGITHAENDDDQQAIAAMMRAQEADPTNLEVL
LALGVSHTNELEQTAALKYLYGWLRHHPKYGTLAPPELANSLYYADVARLFNEAAQMSPE
DADVHIVLGVLYNLSREYDKAIASFKTALKLKPNDYSLWNKLGATQANSVQSADAILAYQ
QALDLKPNYVRAWANMGISYANQGMYEESIRYYVRALAMNPKADNAWQYLRISLSCVSRN
DMVEACDSRNLELLQKEFPL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcgtgaactggttacgggaggagctgcttgtgccgttcctggttcttcttcc
tcttcctccaatcctgtaggtgctttcgccaacgctctcatcggttcttcttccaagacc
cagggggtgttgaaggagattccaaacgcagcagctgcttctccccacgcccaattctac
ccccacgccgatgatcccgttgctgctcttcctggctctgagctcgaccgcccctttctc
caatctaatccccagggctccgagttcatcagaggcttccgcactgccgatgccaatgga
ctcgcagatgcatgggaagagatacagcgccaacctcactttgaccgcgtttacgagggt
gccacgccagcaccaccaattcaaccctctcttgatggaccacctcaaagggtgctgtca
agctttttgcactcctttgttgacagtagccgaagtggaattcctttacaccccacccca
cttcctctgttaggattgtctcaaggtgataaacagtgcatacgtgatcgtagcagcata
atggcccgacacatttttgctgataagagtgaagaatttatcaatgctcaggtaaatgca
ctcttgagttcattggaaatagaaaatgatatccatgccaggggacccatgcctgggaga
tttagagaactggaggactactggaatgaatcccaaggtgtcctgaagcctggtgctcat
gctgctgatggatgggttactgaattcagccaaaatagaccacaccatggtgatctggaa
gcttgggctcactcatttgaacaaaagcatggtgctggtggttgggcctctgaatttgag
caggaacaagctcagttaacatctgtagatcaaatgagagggggaaatatagaaagtttg
gctgcaattcagcagactaggatgcttgcacatacactctctcaaaacagtgatcctaaa
tttcagaattcaaaatttcttcaatttgtatcaaagatgagtcgtggtgaacttatcatt
gacgataatcaggtcaaaccagcatcagagaactgggcaacagaatatcagcaacagtac
aatggaggtgcttcttgggctgatgaatttgttcatgatgaggttttccgtggacctgac
cattgggccaatgaatttggtgctgaaagattgcaacaagagtctgttgatgatcaatgg
gtcaatgaattctcaaagttgcatgttgatgactgggcagaagaatttggtcgtcaagtt
ggtgagggggctttgggagatagttcgtctgataactgggcaaattcatatgatgagttc
cttaacgagcaattagctgctaagcagcggtcggacgcttcaaggggtgtttatgtattt
tctgatatgaatccatatgttggtcatcaaaatcctttaaaagaaggtcaagagctattc
aggaaagggcttttgagtgaagcagtgcttgccctagaggctgaagttatgaaaaaccct
gagaatgctgaaggttggagattgctaggaataacccatgctgaaaatgatgatgaccaa
caggctattgcagcaatgatgcgtgctcaggaggccgatcctaccaatctggaagtactt
cttgctcttggtgtgagtcatacaaatgaattggaacagactgctgctttaaagtatctg
tatggatggttacgtcatcatccaaagtatggtactcttgcgccaccagagcttgctaat
tctttgtattatgctgatgttgctagattattcaatgaagctgctcagatgtctcctgag
gatgctgatgtacacattgtcctcggtgttctgtataatttgtcgagagaatatgataag
gccattgcatctttcaaaactgctttgaaacttaaacctaatgattattctctttggaac
aagcttggtgcaacacaagccaacagtgtgcagagtgctgatgcaatattagcttatcaa
caggcactagatttgaagccaaactatgttcgtgcttgggcaaacatgggtatcagttac
gccaaccagggtatgtatgaggagtcgatccgatattatgttcgagcactggcaatgaat
cccaaggctgataatgcatggcaatatctaagaatatctttaagctgtgtctcgcggaat
gatatggtggaagcttgtgattccaggaatcttgagcttttacagaaggagtttcctcta
tga
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