KEGG   Gossypium hirsutum (upland cotton): 107931445
Entry
107931445         CDS       T04793                                 
Name
(RefSeq) calnexin homolog
  KO
K08054  calnexin
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
ghi04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107931445
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107931445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ghi03110]
    107931445
   04131 Membrane trafficking [BR:ghi04131]
    107931445
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:ghi04091]
    107931445
Chaperones and folding catalysts [BR:ghi03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   107931445
Membrane trafficking [BR:ghi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    107931445
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    107931445
Lectins [BR:ghi04091]
 L-type lectins
  107931445
SSDB
Motif
Pfam: Calreticulin Phage_holin_2_1 CFAP143
Other DBs
NCBI-GeneID: 107931445
NCBI-ProteinID: XP_016718805
UniProt: A0A1U8LW54
LinkDB
Position
D09:54359739..54362713
AA seq 532 aa
MMIMTRYALLLLLAFASLQLLCFAADDDVVFYDSFEESFDGRWIVSDKDDYKGVWKHSKS
EGHDDYGLLVSEMAKKYAIVKELDEAVNLKDGTTVLQFETRLQGGLECGGAYLKYLRPQD
AGWKPTEFDNESPYSIMFGPDKCGATNKLHFILKHKNPKSGEYIEHHLKYPPSVPSDKLT
HVYTAILKPDNEVSILIDGEEKKKASFLSAEDFEPPLIPSKTIPDPDDKKPEDWDERAKI
PDPDAVKPEDWDEDAPMEIEDEEAVKPESWLDDEPEEIDDPEATKPEDWDDEEDGEWEAP
KIENPKCEIAPGCGEWKRPMKRNPAYKGKWSPPLIDNPSYKGIWKPQEIPNPNYFELEKP
DFDPIAAIGIEIWTMQDGILFDNILIAKNDKVAESYRETTWKPKFEVEKEKQKAEDEAAD
SARLAGFQRKVFDVLYKVADIPFLSKYKHQILDLIEHAETQPNLTIGVLVSIVVIILTIF
FKLIFGGKKQPRVEKKPEVAKTSNGEGSSGEKAEEAEKEEAAAAPRRRRRDN
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgatgataatgacgcgttacgctcttcttctcctattagctttcgcttcgctgcaactc
ctctgcttcgccgctgatgatgacgtggtgttctatgattcatttgaagagtcatttgat
ggacgatggatcgtttctgataaagatgattataaaggtgtgtggaagcattccaagagc
gaggggcatgatgactatggtcttctcgtgagtgagatggcaaagaagtatgcaatagtg
aaagagcttgatgaggctgtgaatctcaaagatggtaccactgtgcttcagtttgagact
cgcctacagggtggactggaatgtggtggtgcatatttgaaatatcttcgtcctcaagat
gctgggtggaagcctacggagtttgacaatgaatccccttactctatcatgtttggaccc
gacaaatgcggggccacaaacaagttgcacttcatcctgaagcataagaatcctaaaagt
ggggaatacattgaacaccatctgaaataccctccttctgtcccatctgacaagcttact
catgtctacactgccatattgaagcctgacaatgaggtcagcattctgattgatggtgag
gaaaagaagaaggctagcttcctttcagcagaagattttgagcctccacttatcccttcc
aagacaattcctgatcctgatgataagaagcccgaggactgggatgagagagcgaagatt
cctgatccagatgccgtgaagccagaggattgggatgaggatgcacccatggaaattgag
gatgaggaggctgtgaaacccgaaagttggttagatgatgaacccgaggagattgatgat
cctgaggcaaccaagcctgaagattgggatgatgaagaagatggtgagtgggaagccccc
aaaattgagaacccaaagtgtgagatagcccctggttgtggcgaatggaagaggccaatg
aagaggaatccagcttataaaggaaaatggtctcctccactaattgacaatcccagttac
aagggtatttggaagcctcaggagattccaaaccccaactactttgagcttgaaaagccc
gactttgatcctattgctgccattggtattgagatttggacaatgcaagatggtatatta
tttgacaatattttgatagccaaaaacgacaaggttgccgagtcatatcgggagaccacg
tggaagccaaagtttgaggttgagaaggaaaaacagaaggctgaggatgaagctgccgat
tctgccaggcttgcaggctttcagaggaaggtttttgatgtcttatacaaggttgctgac
attcctttcttaagcaaatacaagcatcaaattctcgatcttattgagcatgctgagaca
cagccgaacctcaccattggtgtcttggtctctattgtggtgattattctcacgattttc
ttcaagctcatttttggtgggaagaaacagccaagagtagagaagaaaccagaggttgct
aaaacatcaaatggtgaaggaagcagtggagaaaaagctgaagaggcggagaaggaagaa
gctgctgccgctcctcgccgaaggcgccgtgacaattga

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