Gossypium hirsutum (upland cotton): 107931445
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Entry
107931445 CDS
T04793
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107931445
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107931445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107931445
04131 Membrane trafficking [BR:
ghi04131
]
107931445
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ghi04091
]
107931445
Chaperones and folding catalysts [BR:
ghi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
107931445
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
107931445
Autophagy
ER-phagy
Other ER-phagy associated proteins
107931445
Lectins [BR:
ghi04091
]
L-type lectins
107931445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Phage_holin_2_1
CFAP143
Motif
Other DBs
NCBI-GeneID:
107931445
NCBI-ProteinID:
XP_016718805
UniProt:
A0A1U8LW54
LinkDB
All DBs
Position
D09:54359739..54362713
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AA seq
532 aa
AA seq
DB search
MMIMTRYALLLLLAFASLQLLCFAADDDVVFYDSFEESFDGRWIVSDKDDYKGVWKHSKS
EGHDDYGLLVSEMAKKYAIVKELDEAVNLKDGTTVLQFETRLQGGLECGGAYLKYLRPQD
AGWKPTEFDNESPYSIMFGPDKCGATNKLHFILKHKNPKSGEYIEHHLKYPPSVPSDKLT
HVYTAILKPDNEVSILIDGEEKKKASFLSAEDFEPPLIPSKTIPDPDDKKPEDWDERAKI
PDPDAVKPEDWDEDAPMEIEDEEAVKPESWLDDEPEEIDDPEATKPEDWDDEEDGEWEAP
KIENPKCEIAPGCGEWKRPMKRNPAYKGKWSPPLIDNPSYKGIWKPQEIPNPNYFELEKP
DFDPIAAIGIEIWTMQDGILFDNILIAKNDKVAESYRETTWKPKFEVEKEKQKAEDEAAD
SARLAGFQRKVFDVLYKVADIPFLSKYKHQILDLIEHAETQPNLTIGVLVSIVVIILTIF
FKLIFGGKKQPRVEKKPEVAKTSNGEGSSGEKAEEAEKEEAAAAPRRRRRDN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgataatgacgcgttacgctcttcttctcctattagctttcgcttcgctgcaactc
ctctgcttcgccgctgatgatgacgtggtgttctatgattcatttgaagagtcatttgat
ggacgatggatcgtttctgataaagatgattataaaggtgtgtggaagcattccaagagc
gaggggcatgatgactatggtcttctcgtgagtgagatggcaaagaagtatgcaatagtg
aaagagcttgatgaggctgtgaatctcaaagatggtaccactgtgcttcagtttgagact
cgcctacagggtggactggaatgtggtggtgcatatttgaaatatcttcgtcctcaagat
gctgggtggaagcctacggagtttgacaatgaatccccttactctatcatgtttggaccc
gacaaatgcggggccacaaacaagttgcacttcatcctgaagcataagaatcctaaaagt
ggggaatacattgaacaccatctgaaataccctccttctgtcccatctgacaagcttact
catgtctacactgccatattgaagcctgacaatgaggtcagcattctgattgatggtgag
gaaaagaagaaggctagcttcctttcagcagaagattttgagcctccacttatcccttcc
aagacaattcctgatcctgatgataagaagcccgaggactgggatgagagagcgaagatt
cctgatccagatgccgtgaagccagaggattgggatgaggatgcacccatggaaattgag
gatgaggaggctgtgaaacccgaaagttggttagatgatgaacccgaggagattgatgat
cctgaggcaaccaagcctgaagattgggatgatgaagaagatggtgagtgggaagccccc
aaaattgagaacccaaagtgtgagatagcccctggttgtggcgaatggaagaggccaatg
aagaggaatccagcttataaaggaaaatggtctcctccactaattgacaatcccagttac
aagggtatttggaagcctcaggagattccaaaccccaactactttgagcttgaaaagccc
gactttgatcctattgctgccattggtattgagatttggacaatgcaagatggtatatta
tttgacaatattttgatagccaaaaacgacaaggttgccgagtcatatcgggagaccacg
tggaagccaaagtttgaggttgagaaggaaaaacagaaggctgaggatgaagctgccgat
tctgccaggcttgcaggctttcagaggaaggtttttgatgtcttatacaaggttgctgac
attcctttcttaagcaaatacaagcatcaaattctcgatcttattgagcatgctgagaca
cagccgaacctcaccattggtgtcttggtctctattgtggtgattattctcacgattttc
ttcaagctcatttttggtgggaagaaacagccaagagtagagaagaaaccagaggttgct
aaaacatcaaatggtgaaggaagcagtggagaaaaagctgaagaggcggagaaggaagaa
gctgctgccgctcctcgccgaaggcgccgtgacaattga
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