Gossypium hirsutum (upland cotton): 107931464
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Entry
107931464 CDS
T04793
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107931464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107931464
03036 Chromosome and associated proteins [BR:
ghi03036
]
107931464
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
107931464
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
107931464
RSF complex
107931464
WICH complex
107931464
B-WICH complex
107931464
NORC complex
107931464
BRF complex
107931464
NuRF complex (fruit fly)
107931464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
107931464
NCBI-ProteinID:
XP_016718836
UniProt:
A0A1U8LW79
LinkDB
All DBs
Position
D09:complement(53752798..53759226)
Genome browser
AA seq
1065 aa
AA seq
DB search
MAKLSKPTSSDEALSDGSSSSEEERIDDQINGDEDDEEELEAVARSAGASDEDEDDNAAP
DANADDAYEYESNGAEPDISKREKERLKEMEKLKKQKIQEILDAQNAAIDADMNNKGKGR
LKYLLQQTELFAHFSKGEQSSTQKKVKGRGRHSSKVTEEEEDEEYLKEEEDGLSGNTRLV
TQPTCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEYRGITG
PHMVVAPKSTLGNWVNEIRRFCPVLRTVKFLGNPEERRYIREELLVAGKFDVCVTSFEMA
IKEKSALRRFSWRYIVIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWAL
LNFLLPEIFSSAETFDEWFQISGENDEQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKET
ILKVGMSQMQKHYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPY
TTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGN
TGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR
AHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV
RFGAEMVFSSKDSTVTDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDDTAELYDFD
DDKDENKFDFKKIATENWIEPPKRERKRNYSESEYFKQTLRQGGPAKPKEPRIPRMPQLH
DFQFFNTQRLSELYEKEVRYLMQTHQKNQIKDSIDEAEPEEGGDPLTAEELEEKEQLLEE
GFSSWSRRDFNTFIRACEKYGRNDIKSIASEMEGKTEEEVQRYAKVFKERYKELNDYDRI
IKNIERGEARISRKDEIKKAIGKKLDRYKNPWLEMKIQYGQNKGKLYNEECDRFMICMVH
KLGYGNWEELKAAFRMSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQAR
KEKKLAKNMTPSKRGGRQPIESPAQPKKPKQLSMDDYVISGKKRK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttatcgaaaccgacgtcgtccgatgaagcattatccgatggttccagttca
tcggaagaagagaggatcgacgatcagatcaacggcgatgaagacgatgaagaagagctc
gaagccgtcgctcgttccgccggtgcttccgatgaagacgaagatgataacgctgcacct
gatgcaaacgcggatgatgcttacgagtatgagtctaacggggctgaaccagatattagt
aagcgagaaaaggagaggttaaaagaaatggagaaactaaagaagcagaagattcaggaa
atattggatgctcaaaatgccgccattgatgctgatatgaataacaaggggaaggggcgt
ttgaagtatcttttgcagcagacggagttgtttgctcatttttctaaaggtgaacaatca
tcaacgcaaaagaaggtgaaaggaaggggacgtcattcatcaaaagtaactgaggaggaa
gaagatgaagagtacctcaaggaggaagaagatggtttgtctggaaacacgcgattggtc
actcaacctacttgtattcaaggaaaaatgagggactaccaacttgctggtttaaattgg
cttatacgactgtatgagaatggtataaatggaattcttgcagatgaaatgggtcttggg
aaaactttgcaaactatttctttattgggctatctgcatgagtaccggggaattactggc
cctcacatggttgttgctccaaaatcaactctcggtaactgggtgaatgaaattcgtcga
ttctgcccagtcctgcgaactgtaaaatttcttgggaatcctgaagaaagaagatacatt
cgtgaggagctacttgttgctgggaagtttgatgtctgtgtcacaagttttgagatggcc
attaaggagaagtctgccttgcgtcgttttagttggcgctatatagttattgatgaagcc
catcggatcaagaatgagaattcacttctttcaaaaacaatgaggctctacaacactaat
taccgtcttcttattactggtactccacttcagaataatctccatgagctctgggctctt
cttaactttctactgccagagatttttagttcggccgaaacttttgacgagtggtttcag
atttctggtgaaaatgacgagcaggaagttgttcaacaacttcacaaggttcttcggcca
tttctccttcgaagattgaaatcagatgttgaaaaaggattacctcccaaaaaggaaact
atcctgaaagtaggaatgtcccagatgcagaaacattactacagggctttgctgcaaaaa
gatcttgaagttgttaatgctggcggagagcgtaagcgtcttctgaacattgcaatgcag
ctgcgtaaatgctgtaatcacccatatctttttcaaggtgctgaacctggacctccatat
actacaggggaccatcttataaccaatgctggcaaaatggttctcttggacaagctactg
ccaaagctaaaggagcgtgattctagagttctgatattttctcagatgacaaggttgctg
gatattcttgaagattatttgatgttccgtgggtacctttattgtcggattgatggtaat
acgggtggagaagaccgtgatgcttctattgaagcctttaataagccaggaagtgagaaa
tttgttttcttgttatcaactagagctggaggtcttggtattaatcttgctacagcagat
gttgtcatcctttatgatagtgactggaatccacaagttgatctgcaagcacaggatcgt
gctcatagaattggtcaaaagaaggaagttcaagtgtttcgcttttgcacggagtacact
attgaggaaaaggtgatagagagggcctacaaaaagcttgccctagatgctctggttatt
caacaaggacgattagcagagcagaagactgttaacaaagatgagttgcttcaaatggtg
agatttggtgctgaaatggtctttagttccaaggatagcacagttacggatgaagacatt
gatagaatcattgccaaaggagaagcagcaacagctgaacttgatgccaagatgaagaaa
tttacagaggatgctattaaatttaagatggatgatactgctgaattgtatgattttgat
gatgacaaggatgaaaacaagtttgacttcaagaaaattgcaactgaaaattggattgag
cctccaaaaagagagcgaaagcggaattactcagaatctgagtacttcaaacaaaccctg
cgccaaggtggtccagcaaaaccaaaggaacctcgaattcctcgcatgcctcagctgcat
gatttccagttttttaacactcagaggctaagtgagttgtatgagaaagaagtgcgctat
cttatgcaaacccatcagaagaatcagataaaggattcaattgatgaggctgaacctgaa
gaaggtggagatccactaactgctgaagaattggaagaaaaggaacaactattagaagag
gggttttcttcatggagcagaagagatttcaatactttcataagagcttgtgagaagtat
ggacgaaatgatataaaaagtattgcttcagaaatggaagggaaaactgaggaggaagtt
caacgatatgctaaagtttttaaagaacgatacaaggagttaaatgattatgataggata
ataaagaacattgaaagaggcgaagccagaatctctagaaaagatgagatcaagaaagca
attggcaagaaattggatcgctacaagaatccatggctggaaatgaagatccagtatggt
caaaacaaagggaagctgtacaatgaagaatgtgatcggttcatgatatgtatggttcac
aagcttggatatgggaattgggaggaattgaaggcagcattcagaatgtctcctttgttt
cgatttgattggttcgttaagtcacggacaactcaagagctggcaaggagatgcgatacc
ctcatccggttggttgagaaggaaaatcaggaatatgacgagagggaacgacaagcccgc
aaggagaagaaacttgccaagaacatgacgccatctaagcgaggtgggaggcagccgatt
gagagtcctgctcaaccaaagaaaccaaaacagctatcaatggatgattacgtgatctcg
ggaaaaaagaggaaatga
DBGET
integrated database retrieval system
