Gossypium hirsutum (upland cotton): 107931491
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Entry
107931491 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107931491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107931491
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107931491
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
HECT type E3
107931491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
107931491
NCBI-ProteinID:
XP_040957387
LinkDB
All DBs
Position
D09:complement(53823733..53833417)
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AA seq
1032 aa
AA seq
DB search
MFFSGDPTTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRQQNSAALKIQKYFRGRK
VVEVERAKVREQFYKNYGKDCHHVDRHCFGPDSEFLRQLIFFVNAWNMNDFSVLVETCRF
IQHFVRESGDVVELFAGTDYLSNHSLVVYRLKRLSFACIQAIHHNRNQLKDQLLMTGEEP
SASTAILLQALVLILDPKLPWACKTVGYLLQRNVFSLFREVILTAKENINANGSFGKVSA
LEHVLACMISHVGQSPCICTNVDPQWSFSFQILTIPFLWKKFPYLKEVFASRSLTQYYTN
QMALCVQNHANVLPTDMLNEFPGYACILGNILETTGATLSQPDCSFEMALDLAAVTTFLL
EALPPIKSSSRESSTVGEDDMIIGDESVEIVLDDNLQQQITNAIDSRFLVQLTNVLFGGI
STAHGSHNEGPDDMEVAAVAAACAFLHVTFNTLPLERIMTVLAYRTELVPVLWNFMKRCH
QNQKWSSLPERFSYLLGDAPGWLLPLSVFCPVYKHMLMIVDNEEFYEQEKPLSLKDVRCL
IVILRQALWQILWVNPSAHPSSGKFISNTSGHKKHPVEAIQSRVGTVASELLSQLQDWNN
RRQFTPPSDFHADGVNDYFISQAVMEGTKAHDILKQAPFLIPFTSRVKIFTSQLASVRHR
QEAHGVFTRNRFRIRRDHILEDAYNQMSALSEEDLRGLIRVTFVNEFGVEEAGIDGGGIF
KDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGSLLAKAMFEGIL
VDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYKEDISGLELYFVIVNNEYGE
QTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSTHFLRGFQQLMRKEWIDMFN
EHELQLLISGSLDSLDVDDLRQNTNYAGGYHGEHYVIDMFWEVLKSFSLENQKKFLKFVT
GCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYGSKEQLETKLL
YAINADAGFDLS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctcgggtgatccgactactcggaaacgggttgatttgggcggtcggagctcc
aaagagagagataggcagaaacttcttgagcaaacgcgtttggaacgcaaccgccgtctt
tggttgcgccagcaaaattctgcagctctcaagattcagaaatacttcagagggagaaag
gtagtggaagttgaacgagccaaggtgcgagagcagttctacaaaaattatggaaaggac
tgccatcatgtagacaggcattgttttggtccagactcagagtttctccgccagctaatt
ttctttgtcaatgcatggaatatgaatgatttttctgttcttgttgagacttgccgattc
attcagcattttgttcgagaaagtggggatgttgtggaactctttgcaggcacggactac
ttatccaatcattctttggttgtctacaggttgaagcgactctcatttgcttgcattcag
gctatacatcacaacagaaatcaattgaaagatcaactgttgatgacgggagaggagcct
agtgcatcaacagccatattgcttcaagcattggttttgatattagaccctaaactgcca
tgggcttgtaagacagttggttatctcttgcaaagaaatgtattctctctgtttagagaa
gttattttaactgcaaaggaaaacataaatgctaatggttcttttgggaaagtatctgcg
ttagagcatgtgcttgcttgtatgatttctcatgttggtcagagtccatgtatttgcaca
aatgtggatccccagtggagtttctcattccaaattcttacaatccctttcttatggaaa
aaattcccatacttaaaagaggtttttgcttctcggagcttgacccaatactacactaat
cagatggctttgtgtgtgcaaaaccatgctaatgtacttcccactgatatgttgaatgag
tttcctggttatgcctgcattcttggtaatatattagaaacaacaggtgctactttatct
cagcccgactgctcatttgaaatggccttagaccttgcagcagttacaacattcttattg
gaagctcttcctcctataaaatcttcaagcagagaaagttctacagttggggaggatgac
atgataattggtgatgaatcagtggaaattgttttggatgataatttgcaacagcagata
acaaatgctattgattcacgttttcttgtgcaattgactaatgtgttatttggagggatt
tccactgcccatggttcacataatgaaggcccagatgatatggaggtggcagctgttgca
gctgcgtgtgcttttttgcatgttacattcaatactttacctctagagagaatcatgact
gttctagcatatagaactgaacttgttccagtgctttggaattttatgaagcgatgtcat
caaaatcaaaagtggtcgtccttgcctgagcgcttttcatatcttctgggagatgcacct
ggttggctgctacctctgtctgttttttgtccagtgtacaagcacatgcttatgatagtt
gataatgaggagttctatgagcaggagaagcctctgtctttgaaggatgtcagatgccta
attgtcattctgagacaggctttgtggcagatcctatgggtgaatccttcagctcacccc
agttctgggaaattcatctccaacacttctggtcataagaagcaccctgttgaagctatt
caaagtagggttggtactgtagcctctgagctgctatcccagttgcaagattggaataac
cggcggcagttcactccccctagtgacttccatgctgatggtgtaaatgactattttatt
tctcaggctgtaatggaaggcacaaaagcgcatgacatattgaagcaagcacctttcttg
attccattcactagcagagttaaaatattcacttcacaactagcctcagtcaggcataga
caagaggctcatggtgtttttaccagaaaccggttcagaatacgaagggatcatattctg
gaagatgcgtataatcagatgagtgcattatccgaagaggatcttagaggactgattcgt
gtaacatttgtcaatgaatttggagtggaggaagctggtattgatggcggtggaattttc
aaagattttatggagaatattactcgagctgcatttgacgtgcagtatgggttatttaag
gaaacagctgatcaccttttatacccaaatcctggatcaggaatgatacatgaacaacac
ctccaatttttccatttcttgggatcactccttgctaaggccatgtttgaaggaattctt
gtagatataccatttgcaacattcttcctgagcaaattgaaacaaaagtacaactattta
aatgatttgccttccttggaccctgagttatatcgtcaccttattttcttgaagcattat
aaagaggacatttcagggttggagctctactttgtaattgtgaataatgaatatggagag
caaacagaagaagagctgcttccaggaggcaaaaacattcgtgttactaatgagaatgtt
atcacatttattcaccttgtatctaaccaccgattgaattttcagatacgacaacaaagt
acacatttccttaggggatttcagcaacttatgcggaaagagtggattgatatgtttaat
gaacatgagttgcagcttctgatatcaggttcacttgacagcttggatgttgatgaccta
cgacagaacactaattatgcagggggctatcatggtgagcactatgtcattgatatgttt
tgggaagtcctcaaaagcttttctctggaaaaccaaaagaaatttttgaagtttgtgact
ggttgttcccgaggaccgttgctgggattcaaatatcttgaacctttattttgcatacaa
agagccgctggaagtgcctctgaagaagcattggaccggttaccaacgtctgcgacttgt
atgaaccttttaaagcttccaccatacggaagcaaagagcaactggaaaccaaattgcta
tatgctataaatgcagatgctggttttgatttgagttga
DBGET
integrated database retrieval system
