Gossypium hirsutum (upland cotton): 107931592
Help
Entry
107931592 CDS
T04793
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107931592
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107931592
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107931592
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107931592
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Helicases
107931592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
107931592
NCBI-ProteinID:
XP_016719015
UniProt:
A0A1U8LWR0
LinkDB
All DBs
Position
D04:2008992..2013833
Genome browser
AA seq
598 aa
AA seq
DB search
MKKTQKTNKEKESNTKTRTKESEIFASCSFSSLGLHSTLSEQLQERLGFEAPTLVQAQAI
PVILSGRHVLVNAETGSGKTIAYLAPIIHYLQGYNPRIERSHGTFALVLVPTRELCLQVY
EILQKLLHRFHWIVPGYVMGGENRNKEKARLRKGISILIATPGRLLDHLKNTSSFVHTNL
RWIIFDEADRILELGFGKDIEEILDLLGSRANESVEKGKFSEFQRQNLLLSATLNEKVNH
LSKISLENPVMIGLDNMKMQPDSSVNQTGSLGSDVDEDLDYSIKSVNSSSGDYRLPAQLV
QRFVKVPCGSRLAVLLSILKHLFEREASQKVVVFFSTCDAVDFHYMLLSEFQWSPYSQFE
EELKQMFLKCKTFRLHGNMKQEDRRTTFSAFKTEKSALLVSTDVAARGLDFPKVRCIIQY
DSPGEASEYVHRVGRTARLGERGESLLFLQPIEVDYLQDLEKHGVSLTEYPLLKIIDSFP
LHSQMHRVKKFVSLESHPWVVSLQRELESYISAEPKIKKQAKDAFCSWVRAYTAHRGDLK
QIFMVKKLHLGHVAKSFALREQPSLVGKAFQNQSKKRKRDLKQKQKGLFKKRKVASKT
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacccaaaaaacaaacaaagagaaagaatcaaacaccaaaacccgaaccaaa
gaatcggagatatttgcttcgtgttcattctccagtcttggcctccactccactctgtct
gaacaactacaagaaaggttgggttttgaagctccaactcttgtccaagctcaagctatt
cctgttatactctctggtcgtcatgtacttgttaatgcagaaacggggtctggcaaaaca
atagcatatttggctccaatcattcattacttgcagggttacaatccccgaattgagcgt
tctcacggtacttttgcgttggtccttgtaccaacgcgtgagttatgtttgcaggtgtat
gagattctgcagaagttgttgcatcgttttcattggattgttcctggttatgtaatgggt
ggtgaaaacaggaataaagagaaagccaggctgcggaaaggcatttctattcttattgca
acacctggacggctgttggatcacttaaaaaacacatcatcttttgtgcacacaaatttg
cggtggataatctttgatgaagcggacagaattctggagttaggatttggaaaagatatt
gaagagatattggatcttttgggttctagggcaaacgaatctgttgaaaagggaaaattc
tctgaatttcaaagacaaaatttgctattatcagctacattaaatgaaaaagtaaaccat
cttagtaaaattagtttagaaaatcctgtaatgattggtcttgataacatgaagatgcaa
ccagattcatcagttaaccaaactggatctctgggatccgatgtagatgaggaccttgat
tactcaatcaagtctgtaaattcttcaagtggggattataggcttccagctcaattggtt
cagagatttgttaaggtgccctgtggttcacggcttgctgtacttctttccattctaaaa
catcttttcgagagagaagcttcccaaaaggttgtggtattcttttcaacatgtgatgca
gtggattttcactacatgctgttgagtgagttccagtggtcaccctactcgcaatttgaa
gaagaacttaagcagatgtttctgaaatgcaaaacttttaggttacatgggaatatgaag
caggaagatagaagaaccaccttcagtgccttcaaaacagaaaaatcggcacttcttgtc
tctacagatgttgctgctaggggcttagattttccaaaagttagatgtatcatacagtat
gattctccaggggaggcctctgaatatgtgcatagagtaggtaggacggctcgactgggt
gaaagaggagaatccttactatttctacaaccaatagaagtggattacttgcaagatcta
gagaaacatggtgtgtcattgacagagtatccactcctcaaaataatagattctttccca
ttgcacagtcaaatgcatcgtgtcaagaagtttgtttctttagaatcacatccatgggtt
gtatctcttcagagggagcttgaatcatacatctcagctgagccaaagattaagaaacaa
gcgaaggatgcattttgctcttgggtccgtgcatacacagcacatcgcggagacctgaaa
caaattttcatggtgaagaagcttcatttagggcatgttgcaaaaagttttgcattaaga
gagcagccatcattggtaggaaaggcattccaaaaccaatcgaaaaagaggaagagggat
ctgaagcagaagcagaaaggtctatttaagaagaggaaagttgccagtaaaacatga
DBGET
integrated database retrieval system
