Gossypium hirsutum (upland cotton): 107931836
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Entry
107931836 CDS
T04793
Name
(RefSeq) la-related protein 6C-like
KO
K15191
La-related protein 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107931836
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
107931836
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PAM2
CCDC106
Whi3-like_N
EBNA2_Core
SUZ-C
Motif
Other DBs
NCBI-GeneID:
107931836
NCBI-ProteinID:
XP_016719284
UniProt:
A0A1U8M160
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All DBs
Position
A12:complement(3599411..3603219)
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AA seq
423 aa
AA seq
DB search
MAQAQAEAEEKPEEPQEKFEAKGAMVTSVTTNTSCSSSSSGGGSNNGVSFKFNAHAQEFV
PRSHTQIPISGYYYPCFHYLGGAAAAAGSSDWFLVGDQERAACLISNPNISIPHCSSKNV
LTDDLRVKIIKQVEYQLSDMSLLANESLSKQISKDPEGYVPISFIASTKKIKSLVNANQL
LAQALRSSTKLVVSADGKKVRRKHPFTEKDREEVQARTVIVENLPEDHSHQNLDKIFNVV
GSVKNIRICHPQESNSSKSKTDFFNRNKLHALVEYDSPHIAEKAVEKLNDEGNWRKGLRV
RLLLGLTPKSVLKTRKSEFDGILDEDDSLLNETSDDSSQPNNTTESTENNSEDTATGSKK
GRAKGRGKGRGRVQNNKHALSPQSSNASQCEASAKQISKGPRMPDGTKGFTMGRGKPLTS
SVK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcacaagctgaagccgaggaaaaacctgaagaaccccaagaaaagtttgaa
gccaaaggtgccatggtaacatctgtaacaacaaataccagctgtagcagtagtagtagt
ggtggtggtagcaacaacggtgtttctttcaaattcaatgcgcatgcacaggagttcgtg
cccagatcgcatacccaaatccccatttcgggttattattacccttgtttccactacctt
ggtggtgctgctgctgcggctggctcctctgattggttcttagttggtgatcaagaacgt
gctgcttgtttgatctctaatcctaatatctccataccccattgttcttccaagaatgtg
ctcacagatgatctccgcgtcaagatcatcaaacaggtggagtaccagttaagtgacatg
agccttctagcaaatgaatcattgtcaaagcaaataagtaaagatcctgagggatatgtg
cccatatcttttattgcttccacaaagaaaatcaagtccctcgtcaatgccaaccagttg
ctggctcaagcacttcggtcctctacaaagcttgttgtgagtgcagatggtaagaaggtt
agacgtaaacaccctttcactgaaaaggacagagaggaagtgcaggctcgtactgttatt
gtagagaatttgcctgaagatcattctcatcagaacctggacaaaatttttaatgtagta
gggagtgtgaagaatatccgaatatgtcatccccaggaatccaattcttccaaatctaaa
accgatttttttaaccgtaacaagctacatgcacttgtggagtatgattcacctcacatc
gctgagaaagcggttgagaagttaaatgatgaagggaattggagaaagggtctgagagta
aggttgctgcttggactcacgcccaaatctgttttgaaaactagaaaatcagaattcgat
gggatactggacgaggatgattcattacttaatgaaacctctgacgattcttctcagcca
aacaatactactgaatcaactgagaacaattctgaggatactgcaacgggatccaaaaaa
ggaagggccaaagggcgaggaaaagggcgtgggcgtgttcaaaacaacaagcatgcatta
tctcctcaatctagcaacgcatcccagtgtgaagcatctgcaaaacagatttctaagggc
cccagaatgccagatggaaccaagggtttcaccatggggcgaggcaagccattgacttcc
tctgtgaagtaa
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