Gossypium hirsutum (upland cotton): 107931920
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Entry
107931920 CDS
T04793
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107931920
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
107931920
TFIIIC, fungi type
107931920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_8
TPR_1
TPR_17
TPR_7
TPR_11
TPR_16
TPR_6
TPR_12
TPR_9
TPR_CcmH_CycH
ANAPC3
TPR_Slam
ARM_TT21
NatA_aux_su
TPR_20
Alkyl_sulf_dimr
DUF7017
Coatomer_E
ARM_TT21_5th
TPR_21
RPN7
HAT_PRP39_C
BCDHK_Adom3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
107931920
NCBI-ProteinID:
XP_016719370
UniProt:
A0A1U8LXT2
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All DBs
Position
A12:complement(104832059..104848571)
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AA seq
856 aa
AA seq
DB search
MSGSGNLPLDYEALAEKKRKALADMQGSEGSSKKARKEDISEGIMDEIMQTLNCGRRRKS
SKKRGRRKGRGNKLSPQIQRIVGDATVHYGNGRFKEAISVLKEGVQLEPKFPHLYHMLGL
SYKALGDNKRAFQFYIIAGLLKPKDPDLWKLLFTWSIEQENVSLTCHCLSKAIMADPTDI
SLRYLQASLYDELGDYQKAAESFEQIQQISPDNVEALKSGAKLYQKCGQIERSFAILEGY
LEGHQDEADLSVINLLVSMLMQNNAYERALRQIEQAHAIYYSGKELPINLKTKSGICHIH
LGDIEKAEVFCSVLQSIAHDHADLVTEVADTFMTLGHVNSALKYYNMLENDDGIDDDHLH
HKIAQCYMSTGEKVLAIKFLRKALERLENNIDARLNLASLLIEDSKEDEAISLLSPPQSF
DLQNINKNSDASKSWWLNGKIKLKLCNIYRAKGMMEDFVNTILPLVQESLYIESLGIKIK
VRRRLRDSELFERVKKVDDLQTDGVFCGSRPMVTAADRLKASRARKLLQKKAALKEEKKA
AALAAGLDWHSDDANNESEEEHFREPPLVNLLKDEEQQDLIIDLCKALESLERYYEALDI
IKLALKSGHNFFPVEKQQQLRSLGAQMAYYTMDSKHGFDCIKHIVQQHPYSITAWNCYYK
VLPRSGKFYSRHCKFLRFFRSKHKDCIPPIVISGHQFTVLSHHQDAAREYLEAYKLLPEN
PLINLCIGTALINLTLGLRLQNKHQCVAQGLAFLYNNLRLCENSQEALYNIGRACHHVGL
VTLAVSYYEKVLAMKEKDHPIPKLPNENWDHAVENHKKDGYCDLRREAAFNLHLIYKKCG
SMDLARQVLKDHCTFD
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttccggcaaccttcctcttgattatgaagctctggcggagaagaagcgcaaa
gcacttgccgatatgcagggcagtgaaggatcatcaaagaaggctagaaaagaggatatt
tcggaagggattatggatgaaataatgcaaactttgaactgtggtcgtcggagaaaatca
agcaagaaacgaggtaggcgaaagggaagagggaataaactgagcccccaaattcagaga
attgttggagatgctacagttcactatggaaatggtcgtttcaaagaggccatatctgtt
ctgaaggaaggtgttcaacttgaaccaaaatttcctcatttatatcatatgcttgggctt
tcttataaagcccttggtgataataaaagagcttttcaattctacatcatagctggactt
cttaagccaaaagatcctgatctgtggaaactgctttttacctggtccatagagcaagag
aatgttagtctgacctgccattgcctttctaaagcaataatggcagatcctacagatatt
agtttaagatatcttcaagcatcactttatgatgagctcggtgattaccagaaagcagct
gagtcatttgaacaaattcagcaaatctctcctgacaatgttgaagcattgaaaagtggg
gctaagttataccaaaaatgtggtcagattgaacgatcttttgctattttggagggctat
cttgagggtcatcaagatgaggctgatttgagtgttattaatcttcttgtttctatgtta
atgcaaaataatgcatatgaaagggctcttcggcaaattgagcaagcccatgctatctac
tattcaggaaaagaactgcctatcaacttgaaaacaaaatcaggaatttgccacattcac
ctgggagatatagagaaagcagaggtgttctgcagtgttttgcaatccatagcacatgat
catgctgacttggttactgaggttgcagatacatttatgactcttgggcatgttaactct
gcattgaagtattacaatatgttggagaatgatgatggaattgatgatgaccatttacat
cacaaaattgctcagtgttacatgtccacgggagaaaaagtgctagcaattaagttcctt
cgaaaagctctggaacgactagagaacaacatcgatgcccgtttaaatttggcttccctg
cttattgaagattctaaagaagatgaagccatttctttgctttctcctccccaaagtttt
gatttacagaatattaacaagaattctgatgcatctaaatcgtggtggcttaatgggaaa
ataaaattgaagctatgcaacatttatagagctaaagggatgatggaggattttgtcaat
actattcttccattggtacaagagtccctttatatcgaatctcttgggataaagataaaa
gttaggcgccgcctaagagatagtgaactatttgaaagagtcaaaaaagttgatgatctg
caaactgatggtgtattttgtgggtcaagaccaatggtaactgcagcagataggttgaaa
gcttccagagcaagaaagctgctacaaaagaaagcagctttgaaggaagaaaagaaagct
gctgcacttgctgccggacttgattggcatagtgatgatgccaataatgaatctgaggaa
gaacattttagagaaccacctctggttaatcttctaaaagatgaggagcagcaagacctt
atcatagacttatgcaaggcattggaatctttggaaaggtattatgaagcattggatatt
atcaaacttgcattaaaatcaggtcataactttttccctgttgagaagcagcagcagctt
cgatcacttggagcacaaatggcatactacaccatggattccaagcatgggtttgactgc
ataaagcacattgttcagcagcacccttacagtattactgcttggaactgctattacaaa
gtactcccaagatcgggaaaattttattcaaggcattgtaagtttttacgttttttccgt
agcaaacacaaagattgcataccacctattgtcatttctggccatcagtttaccgtgctt
agtcatcaccaagatgctgctcgagaataccttgaagcttataagttgttgccagagaat
cctttaattaatttgtgtattgggactgcattgatcaatttaacccttggacttagactc
caaaacaagcatcagtgtgttgcacaaggtttagctttcctctacaacaaccttcgtctt
tgtgagaacagccaggaagcactgtataacatcggacgggcatgtcatcatgtcggacta
gttaccctggcggtttcatactatgaaaaggtgttagcgatgaaggagaaggatcatcca
atcccaaaactccccaatgagaactgggatcatgcggtggagaaccacaaaaaagatggg
tattgtgaccttcgcagggaggcagctttcaatttgcatttaatctacaaaaaatgtgga
tcaatggatcttgctcgccaagtcttgaaagatcattgcacctttgattga
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