Gossypium hirsutum (upland cotton): 107932021
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Entry
107932021 CDS
T04793
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic-like isoform X1
KO
K02357
elongation factor Ts
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
107932021
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107932021
Translation factors [BR:
ghi03012
]
Eukaryotic type
Elongation factors
107932021
Prokaryotic type
107932021
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
107932021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
S1_RRP5
EF-Ts_N
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
107932021
NCBI-ProteinID:
XP_040965349
LinkDB
All DBs
Position
D13:complement(60777288..60782839)
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AA seq
1030 aa
AA seq
DB search
MTPVIPCSTSNTTLILGAACSVRKNTSLTRCSSSRRHTRYALPSLRFILPLSTRVTSFPQ
YRTGYALNGNPGTCISATGTDVAVEQSDAPVDAVETSEKSDSNDVPTQSKRTRSVRKSEM
PPVKDEELIPGAMFTGKVRSIQPFGAFVDFRAFTDGLVHVSRLSDSFVKDVASVVSVGQE
VKVRLVEVNTESGRISLSMRENDGASKRQPQKDGPSGIDRARPARKNASRPGQKKEPMKS
SKFVKGQDLDGTVKNLTRSGAFISLPEGEEGFLPTSEESDDGLMSMMGGPSLQVGQEVKV
RVLRITRGQVTLTMKKEEDNDNLDSQLSQGVVYTATNPFMLAFHNNKEIAAFLDQREKPE
KIEVQKVSDATAAGELVEKETDTVANIANKEETTDKETEESFEVSSPESSAEVPLVDVVE
SDETLGSSGEIVDQVTTSASSVVGEDSDTKDEVKVETPVTEDKIPSATSVQDEVGAIPKE
NGSVGSTYVQPNVPDLKNVEDTAEDNVSSDPSQELADDQIKSSVSEAIEEAENKVENTED
EVPMESPETLSALEVEEVEPPPQKNDEVTNSNGSTPKENAITAAVSPALVKHLREETGAG
MMDCKKALLETGGDIVKAQEFLRKKGLASADKKASRVTAEGRIGSYIHDSRIGVLVEVNC
ETDFVSRGDIFKELVDDLAMQVAASSQVQYLVPEDVPEEIVNKEREIEMQKEDLLSKPEQ
IRSKIVEGRIRKRLQELALLEQPYIKNDKLVVKDWVKQTIATIGENIKVKRFVRFNLGEG
LEKKSQDFAAEVAAQTAAKPVSTVRKEQPASLEAKETDQKPAVAVSAALVKQLREETGAG
MMDCKKALSETGGDLEKAQEYLRMKGLSTADKKSSRLAAEGRIGSYIHDSRIGVLIEVNC
ETDFVGRSEKFKELVDDLAMQVVACPQVQFVSIEDIPVSTVSKEKELEMQREDLASKPEN
IREKIVEGRVSKRLGELALLEQPYIKDDSVLIKDLVKQTVVAIGENIKVRRFFRFTLGET
VEDTKTGTEA
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgtgatcccgtgttctactagcaatactacgcttattctcggtgctgcctgt
tcggtaaggaagaacactagtttaacgagatgcagttcctcaaggagacacacaagatat
gctctaccctcacttagatttatcctacctttgtcaacccgcgttacatcatttccgcaa
tacagaacagggtatgctttgaatggaaacccaggaacctgtatatctgcaactgggact
gatgtagcagtggagcaatctgatgctcccgtagatgcagttgaaacaagtgaaaaatca
gattctaatgatgtaccaacacagtcaaaacgaacgagatctgtaaggaaaagtgagatg
ccgcctgttaaggacgaggagcttattcctggtgcaatgtttaccgggaaagtaagatca
atccaaccatttggtgcttttgttgatttccgggctttcacggatggactggtgcatgtt
tctaggctaagtgatagctttgttaaggatgttgcgagtgttgtttcagttggacaagag
gtaaaggtgaggttagttgaagtaaacaccgagagtgggaggatatcgctttcgatgcgt
gaaaatgatggtgctagtaaacggcagccacaaaaagacggtccttccgggatagacagg
gccaggccagctaggaagaatgcttcaaggcctggccagaaaaaggagccgatgaaaagc
tcaaaatttgtcaagggacaagacctagacggaacggttaagaatttaactcggtcaggt
gctttcatatcacttcccgagggggaagaagggttcttgcctacatcggaagaatctgat
gatggacttatgagcatgatgggagggccatcattgcaggttggccaagaagtcaaagta
cgtgtgttgcgcatcacacggggacaagtaaccttgacgatgaagaaagaagaggacaat
gataacttggactcgcagctcagccaaggtgtggtgtacactgcaacgaatcccttcatg
ctagctttccataataacaaggagattgcggcgtttttggatcagagagaaaagccggag
aaaattgaggttcaaaaggtgtctgacgctaccgcagcaggtgaactggttgaaaaggaa
acggatactgttgccaatatcgcaaacaaggaggaaaccacggataaggaaacagaggag
agttttgaagtttcatctcccgaaagtagcgcagaagttccactagtagatgtggtggaa
agcgatgaaactttgggatcatccggagaaatagtcgatcaagttacaacttcagcaagt
tcagttgttggtgaagattccgatacaaaggatgaagtaaaagtagaaacacccgtgacg
gaggataaaatcccgtctgccacatcagttcaagatgaagttggagctattcccaaggaa
aatggcagtgttggcagcacgtatgtacaacccaatgttcctgatttgaaaaatgttgaa
gatactgcggaagacaatgtaagctctgatccatctcaagaattagctgatgatcagatt
aagtcttctgtaagtgaagcgattgaagaagctgagaacaaagttgagaatactgaggat
gaagtgccgatggaatcaccagaaactctgtctgccttggaagttgaagaggtagaacct
ccacctcaaaagaatgacgaggttaccaattcaaatggctctaccccgaaggaaaatgcg
attacagcagctgtatcaccagctcttgtaaagcatctccgtgaagaaacaggagcagga
atgatggattgtaagaaagcactcttggagaccggaggagatattgttaaagcgcaagag
tttcttcgcaagaaaggcttggcaagtgcagataaaaaagccagtcgagtcacagctgaa
ggaagaataggttcttacattcacgatagtaggatcggtgtcctagtagaggttaactgt
gagacggattttgtctcccgaggtgacatctttaaggagcttgtcgatgatctagccatg
caggttgctgccagttctcaagtacaatatcttgttcctgaagatgttcccgaggagatt
gtaaataaggaaagagaaatagagatgcaaaaggaagatctcttatcaaaaccagaacag
attagatctaagattgttgaaggacgaataaggaagaggcttcaagaattggctttactc
gagcagccctacattaagaacgataagttagtagtgaaagattgggtgaagcagactatt
gctaccattggagaaaatataaaagtgaaaagatttgtgaggttcaatctcggagaggga
cttgagaagaaaagccaggattttgctgccgaagtggctgcccaaactgcagcaaagcca
gtttctactgtcagaaaagaacaaccggcttccttggaagccaaggaaactgaccagaaa
cctgcagtagcagtctcggccgcacttgttaaacaactacgtgaagaaacaggtgctggg
atgatggactgcaagaaagctctgtccgaaaccgggggtgaccttgagaaagctcaggaa
taccttagaatgaaaggcctttcaaccgcggacaagaaatccagccgccttgctgctgaa
ggcagaattggttcctacattcacgactctcggatcggtgtactaattgaagtcaattgc
gagactgactttgttggtagaagtgaaaaattcaaagagttggtcgatgatctagcaatg
caagtcgtggcctgtccacaggtgcagttcgtatccatcgaagacatcccagtgagtacg
gtaagcaaagaaaaagagctcgagatgcaaagagaagacctcgcatcaaaaccggagaac
attagagagaaaatcgtcgaagggagggtatcaaagcggcttggagagcttgcccttttg
gaacaaccatacatcaaggatgacagcgtgttgattaaagacttggtaaagcaaaccgtt
gttgcaatcggagagaacataaaagtccgaaggttctttcggtttactctcggagagacg
gtcgaagatactaaaaccggaacagaagcatga
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integrated database retrieval system
