KEGG   Gossypium hirsutum (upland cotton): 107932265
Entry
107932265         CDS       T04793                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107932265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107932265
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107932265
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107932265
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 107932265
NCBI-ProteinID: XP_016719723
UniProt: A0A1U8LUC3
LinkDB
Position
D07:1724257..1727127
AA seq 128 aa
MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGNL
YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTAVSAAEIKRAQKAEREATDLKGSMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctggccctgatgatatctttctctccacttctcttgctacttatctagac
aagaaactccttgtcttgcttagagatggccggaagcttttgggattactacgttcgttt
gatcaatttgctaatgttgttctagaaggagcttgtgagcgagttattgttggcaatttg
tactgtgatatccccttgggtctatatgtaatccgtggggagaatgttgtcttaatagga
gagctggacttggaaaaggaagagcttccatctcatatgactgctgtctcggctgctgag
attaaaagggcacagaaagccgaaagggaagcaacagatctgaagggctccatgagaaaa
cgaatggagtttctcgatttcgactaa

DBGET integrated database retrieval system