KEGG   Gossypium hirsutum (upland cotton): 107932348
Entry
107932348         CDS       T04793                                 
Name
(RefSeq) GTP-binding protein YPTM2-like
  KO
K07874  Ras-related protein Rab-1A
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107932348
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107932348
   04031 GTP-binding proteins [BR:ghi04031]
    107932348
Membrane trafficking [BR:ghi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    107932348
 Autophagy
  Other autophagy associated proteins
    107932348
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107932348
  Exosomal proteins of other body fluids (saliva and urine)
   107932348
  Exosomal proteins of colorectal cancer cells
   107932348
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    107932348
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N ATP_bind_1 LANC_like CRAL_TRIO_2 G-alpha Septin Dioxygenase_N AAA_29 AAA_5 ABC_tran But2 AAA_22 AAA_16
Other DBs
NCBI-GeneID: 107932348
NCBI-ProteinID: XP_016719805
UniProt: A0A1U8LZ13
LinkDB
Position
D03:complement(53854197..53857909)
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYLESYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYATENVNKVLVG
NKCDLSAKKVVSYEAAKAFADELGIPFMETSAKNATNVEDAFMAMTASIKNRMASQPAMN
NARPSTVQIRGQPVNTNSGCCSS
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcccgaatatgattatctatttaagcttttgcttatcggagattctggtgttggg
aaatcatgtttacttttgaggttttctgatgattcatatttggaaagttacatcagtacc
atcggtgtcgacttcaaaatccgtaccgtggaacaagatggaaaaaccatcaaactccaa
atttgggacactgctggccaagaacgttttcggacaattactagcagctattatcgtggg
gctcatggcatcattgtcgtttacgatgtgacagaccaagagagtttcaacaatgtgaag
caatggttaaacgaaatcgaccgctacgccaccgagaatgtgaacaaggttttagtcggg
aacaaatgtgacctatcggccaaaaaagttgtctcctatgaggcagctaaggctttcgca
gatgaactcgggatacctttcatggaaacaagtgctaagaatgccactaacgtcgaagac
gctttcatggccatgactgcttcgatcaagaataggatggcaagccaaccggccatgaac
aatgctcggccttcgaccgtgcagattcggggacagcccgtgaatacgaattctggttgt
tgctcttcttaa

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