Gossypium hirsutum (upland cotton): 107932396
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Entry
107932396 CDS
T04793
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107932396
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107932396
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107932396
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107932396
03036 Chromosome and associated proteins [BR:
ghi03036
]
107932396
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107932396
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107932396
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107932396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
CLASP_N
Motif
Other DBs
NCBI-GeneID:
107932396
NCBI-ProteinID:
XP_016719858
UniProt:
A0A1U8M2I4
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All DBs
Position
A13:complement(10521463..10528037)
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AA seq
587 aa
AA seq
DB search
MSTVEAPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEDRTRLELIPFLSENNDDD
DEVLLAMAEELGVFVPYVGGVEHAHVLLTPLETLCTVEETCVRVKAVESLCKIGSQMREN
DLIERFTPLVKRLAAGEWFTARVSACGLFHIAYPSAPETLKTELRSIYGQLCQDDMPMVR
RSAASNLWKFAGTVESAHLKADIMQMFEDLTQDDQDTVRLLAVEGCAALGKLLEPQDCAA
RILPVIVNFSQDKSWRVRYMVANQLYELCEALGPEPIRTDLLPAYVRLLRDNEAEVRIAA
AGKVTKFCQILSPELAIQHILPCVKELSLDSSQHVRAALASVVMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNVISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLANQLGVGFFDDKLGGLCMQWLQDKVYSIRDAAAKNLKRLAEEFGPDWAMQHIIPQV
LEIANDSHYLHRMTLLRAISLLGPVMGSEITCSKLLPVVVNASKDRVPNIKFNVAKVLQS
LISVVDQSVVEKTIRPCLVELSEDPDVDVRYFAVQGLQSIDQVTMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggttgaagcaccactgtatccaatagctgtcctgatagatgagctaaaaaat
gacgatatccaacttcgtttaaactcgatccgtaggctttcgacaattgcacgtgctctc
ggggaagatcgaaccaggttggaattaattccatttctcagtgaaaacaatgatgatgac
gatgaggtgcttcttgcaatggctgaggagctgggagtgtttgttccctatgtcgggggt
gttgagcatgcccatgttttgctgacgcctttggaaaccctttgcactgttgaggaaacc
tgtgtaagggtcaaagctgttgagtcattatgcaaaattggatctcagatgagggagaat
gatttgattgagcggtttactcctttagttaagaggctggctgctggagaatggtttaca
gctcgagtttcagcctgtgggctgtttcacattgcttatccaagtgcccctgagacgttg
aaaacagaattacggtctatatacggtcaactatgtcaagatgacatgcccatggtaaga
aggtctgctgcgtcaaatctgtggaaatttgctggaacagttgaatctgctcacttgaag
gctgacatcatgcaaatgtttgaggatcttacgcaagatgatcaagatacagttcgatta
ttggctgttgagggatgtgctgctcttggaaagttgttagagccccaggattgtgctgca
cgcattctccctgtaattgttaatttctcccaggataaatcttggcgtgtgcgttatatg
gttgcaaatcaattatacgaactttgtgaagctctgggaccagagcctattaggactgat
ttgcttcctgcatatgtgcggttacttcgtgataatgaggctgaagttcgcattgcagct
gcaggaaaagtaactaaattttgtcaaattttgagtccagaacttgcaatccaacacatt
cttccatgtgttaaggaactgtcattggattcctcccagcatgtccgcgctgctttggct
tcagttgtgatgggaatggctcctgtccttgggaaggatgcaacaatcgagcagcttctt
ccaatatttctctcccttttgaaggatgaattccctgatgtgcggctcaacgtaatcagc
aaacttgatcaagtgaatcaggttattgggattgatctattgtcccaatccttactacca
gccattgttgagctcgctgaggataggcattggagggttcgacttgcaataattgagtat
ataccattattggcaaatcagttaggggttgggttttttgatgataaacttggtggcctt
tgcatgcaatggttgcaggataaggtttactctattcgagatgcagctgctaaaaattta
aagcgtcttgctgaagaattcggcccagattgggcgatgcagcatattattccacaggta
ctagagatagctaatgattcacactatcttcatcggatgacccttcttcgtgccatttct
ctccttggtcctgttatgggctcagaaataacatgttctaaactgttgccagttgttgtc
aatgcatcaaaagacagggttcccaatattaagtttaatgttgcgaaggttttgcagtct
ctgatttcagtagttgatcagtctgtggtggagaagacgatacgtccatgcttggtagag
ctgagtgaggacccagatgttgatgtccgttattttgcagtccaaggacttcagtcaatc
gatcaggtcaccatgtcaagctag
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