Gossypium hirsutum (upland cotton): 107932401
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Entry
107932401 CDS
T04793
Name
(RefSeq) ubiquitin receptor RAD23c
KO
K10839
UV excision repair protein RAD23
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107932401
09124 Replication and repair
03420 Nucleotide excision repair
107932401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107932401
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107932401
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107932401
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107932401
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
UBA_RAD5A
UBA_3
TECR_N
Crinkler
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
107932401
NCBI-ProteinID:
XP_016719867
UniProt:
A0A1U8LZA7
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Position
A13:complement(10881490..10886540)
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AA seq
384 aa
AA seq
DB search
MKVFVKTLKGTHFNIEVKPEDAVADVKKKIETVQGADVYPAAQQMLIYKGKVLKDDTTLA
ENSVTENSFIVIMLTKNKGASGEGSTASTAPTKKAPEASNLPTAPAPASTAPVATSAMAA
AATESAPVASSTPLSDSDVYGQAASNLVAGSNLEGTIQQILDMGGGTWDRDTVVRALRAA
YNNPERAVEYLYSGIPEQAEAPPVARAPVVGQATNPAAQPQQPAQTAAIPTSGPNANPLD
LFPQGLPNMGASGAGAGTLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPNLMRLI
QEHQGDFLRLINEPAEGGEGNILGQLAEAMPQAVQVTPEEREAIERLEAMGFDRATVLQV
FFACNKNEELAANYLLDHMHDFQD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgtcaaaactctcaaaggcactcacttcaatatcgaagtcaaacccgaa
gatgcggttgcggatgtaaaaaagaaaatagaaactgttcaaggggcagatgtttatcct
gctgcacaacaaatgcttatctataagggaaaggtccttaaagatgacacgacactggct
gaaaacagtgtcactgaaaatagctttattgtgatcatgttgacaaagaataagggtgca
tctggtgagggttcaactgcttcaactgctcctacaaagaaagctcctgaggcaagtaat
ctgccaacagctccagcaccagcttctactgcacctgttgcaacgtcagctatggctgca
gctgccactgaatctgctcctgttgcttcaagtactcctttgtcagattctgatgtttat
ggccaagcagcatctaacctggttgcagggagtaacttagagggaacaatccaacagatt
cttgatatgggtggagggacctgggacagggacactgttgtccgtgcccttcgtgctgct
tataataacccagagagagctgttgaatatttgtattctggcatccccgagcaagctgaa
gctccacctgtggcccgtgctcctgtagttgggcaagccactaaccctgcagcacaacct
caacagcctgcgcaaacggcagctattcctacaagtggaccaaatgcaaatccattagac
ctgtttccccagggccttcccaacatgggtgcaagtggtgctggggctggcactcttgat
tttttacggaacagtccacagtttcaagctttgcgagcaatggtgcaagccaacccacaa
atattgcagcctatgctacaagagttggggaaacaaaatcctaatttaatgagacttatt
caagagcatcagggtgactttcttcgcttgatcaatgaacctgccgaaggtggagaggga
aacattttggggcaattagctgaggcgatgccacaagctgtgcaagtcacacctgaggaa
cgtgaagccatagaacggcttgaagcaatggggtttgaccgtgcaactgtgctccaagtg
ttctttgcgtgcaacaagaatgaggaacttgcagccaactaccttttagatcatatgcat
gattttcaggattga
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integrated database retrieval system
