KEGG   Gossypium hirsutum (upland cotton): 107932479
Entry
107932479         CDS       T04793                                 
Name
(RefSeq) SKP1-like protein 1A isoform X1
  KO
K03094  S-phase kinase-associated protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03083  Polycomb repressive complex
ghi04120  Ubiquitin mediated proteolysis
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107932479
   04120 Ubiquitin mediated proteolysis
    107932479
  09126 Chromosome
   03083 Polycomb repressive complex
    107932479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107932479
   04121 Ubiquitin system [BR:ghi04121]
    107932479
   03036 Chromosome and associated proteins [BR:ghi03036]
    107932479
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107932479
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107932479
   Cul7 complex
     107932479
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107932479
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107932479
SSDB
Motif
Pfam: Skp1 Skp1_POZ Methyltransf_16
Other DBs
NCBI-GeneID: 107932479
NCBI-ProteinID: XP_016719962
UniProt: A0A1U8LZK2
LinkDB
Position
A12:complement(6337235..6338327)
AA seq 160 aa
MGSTSTKIKLRTSDQKVFEVEEAVVVQSQTIKYFYENGCPGSVIHVHSVSGDILSKILNY
CKKHVNSTAGKEDISPEELYEWDANFVKVDQNTLFDLILAANCLKIESLLDLTCQTVANM
IKGKRPEEIRTTFNIKNDYTPEAEEAVRRENKWAFDMLGV
NT seq 483 nt   +upstreamnt  +downstreamnt
atgggatcgacatcgaccaagataaagttgaggacctccgaccaaaaggttttcgaggtg
gaggaagcggttgtagtccagtctcagacgatcaaatacttttacgaaaatggttgcccc
ggcagcgtcatccatgtccatagcgtctccggcgacatcttatccaagattctcaactac
tgcaagaagcacgtaaattccaccgctggcaaggaagacatctcccctgaggaactctac
gaatgggatgctaattttgtcaaggttgaccaaaacaccctcttcgacctcatccttgca
gccaactgtttgaaaatagagagcttgttggacttgacatgccaaactgttgccaacatg
ataaaggggaagagacctgaggagattcgcactaccttcaacatcaagaacgattacacc
cctgaggcagaagaggctgttaggagggagaacaaatgggcattcgacatgcttggggta
tga

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