KEGG   Gossypium hirsutum (upland cotton): 107932504
Entry
107932504         CDS       T04793                                 
Name
(RefSeq) protein HIRA-like isoform X1
  KO
K11293  protein HIRA/HIR1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107932504
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     107932504
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Hira WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st WDR55 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 107932504
NCBI-ProteinID: XP_040955266
LinkDB
Position
D08:complement(692583..698861)
AA seq 1037 aa
MIAEKPSWVRHEGMQIFSIDIQPGGLRFATGGGDHKVRVWNMESVGRNLGKDESTLRLLA
TLRDHFGSVNCVRWAKHGRFVASGSDDQAILIHERKPGSGTTEFGSGEPPDVENWKVAMT
LRGHTADVVDLNWSPDDSMLASGSLDNTIHVWNMSNGICTAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTEGHWAKSLGSTFFRRLGWSPCGHFITTTHGYQKPR
HSAPVLERGEWAATFDFLGHNAPVIVVKFNHSMFKRNSANSQEAKATPVGWVNGAAKIGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGT
VATFHFEVKELGHRLSDAELDELKRSRYGDVRGRQANLAESPAQLLLEAASAKQTTSKKV
ALDVQQNQIPVKSSLDLGVTNKNSKPPNNDGKKTGLSAGDGLNKPVMSAQVTSPVKQREY
RRADGRKRIIPEAVGVPTQQENISGGAQSQALDFPVASSDPRKNDNGIVPADCGLREATI
RGTVGKNFDLKECSGVTARATITESLVIEKVSAGQDHSINVEQSGSLKPSSSTTGSTKSL
SIRVFDEKEGNDLTPVCLEACPKEHAVTDIVGAGNACMTKETEIICTRGGQTLWSDRISG
KVSVLAGNANFWAVGCEDGCLQVYTKCGRRALPTMMMGSAATFIDCDESWKLLLVTRKGS
LYLWDLLNRTCLLRDSLASLITLDHNSSTKGTCTSYDLGTIKVISVKLSKSGFPLVVLAT
RHAFLFDTSLMCWLRVADDCFPASNFASSWNLGSTQTGELASLQVDVRKYLARKPGWSRV
TDDGVQTRAHLEAQLASSLALKSPNEYRQSLLSYIRFLAREADESRLREVCESFLGPPTG
MASDSKNPTWDAYVLGMKKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYASIENNLDQ
RDPSPLTVSQPEIDLMDSNPSATCQTDTVEPTTDKKENPSPSIIDQMDSILSNQVNSGTK
SSDQVNQAPTSEDPAGS
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgattgctgagaaaccaagttgggttaggcatgaaggaatgcagattttctccattgat
attcaacctggtggtcttaggtttgctactggtggaggtgaccataaggttagggtatgg
aacatggaatctgttggcaggaatttgggaaaggatgaatctacattgaggcttcttgca
actttgcgtgatcatttcgggtcggtgaactgcgttaggtgggctaagcatggtcggttc
gttgcgtcggggtctgatgatcaagcgattctaattcatgagagaaagcctggttccggg
acgaccgagttcggtagtggggagcccccggatgttgagaactggaaagttgcgatgacg
ttgaggggacacactgcagatgtggtagatcttaattggtcacctgatgactcgatgttg
gccagtgggagtttggacaacactatccacgtatggaatatgagtaacggtatctgcacg
gctgtgcttaggggtcattctagtctggttaaaggagttgcctgggatcccatcggttcc
ttcatagcgagccaatctgatgacaagaccgttattatatggcgaacaagtgactggagc
cttgctcatagaacagagggccactgggcaaaatcactgggatctacgtttttcaggcgg
cttggatggtcaccttgtggtcatttcataactaccactcatggttaccaaaagccaagg
cattccgcacctgttctcgagagaggggaatgggctgcaacgtttgacttcttaggccac
aatgcaccggttatcgtagtgaagtttaatcactcaatgttcaaaagaaattcagccaat
tcgcaggaagcgaaagccactcctgttggttgggtgaacggagctgctaagattggcggg
aaagaatcacagccatataatgtaattgcaattgggagtcaggaccgcactataaccgta
tggacaactgccagtcctcgcccactctttgttgccaagcatttctttggtcaaagtgtt
gtggatttatcatggagccccgatggctattctctctttgcttgttcattggatggaact
gtggctactttccatttcgaagtgaaagaactgggccacaggttaagtgatgccgaactt
gatgagttaaagagaagtcgttatggtgatgtaagaggtcgacaggcaaatttggcggag
agcccagcacagttattgctcgaagctgcttcagccaagcaaaccactagtaagaaagta
gctttggatgttcagcagaatcagatacctgtaaaatcgtctcttgacttgggggtaaca
aacaaaaattccaagccaccaaacaatgatggaaagaagactgggctttccgctggtgat
ggattaaataaaccggtgatgtctgctcaggttactagccctgtaaaacaaagagaatac
agacgtgctgatggtagaaagagaatcattcccgaagccgttggtgttcctactcagcag
gagaatattagcggcggtgctcagtctcaagcattagatttccctgttgcatcatctgat
ccccgaaaaaatgataacggcatagttcctgctgattgtggtttgagagaagctactatc
aggggaaccgttggcaaaaattttgacttaaaggagtgctcaggggttactgctcgggct
actattactgaaagtctggttatcgaaaaagtttctgctggccaagatcatagtatcaat
gtagaacagtctggaagcttgaaaccatcaagttccaccactggctctaccaaatctctc
tcgattagggtatttgacgaaaaagaagggaatgatttgactccggtttgcttggaagcg
tgtcccaaggaacatgctgtgaccgacattgttggtgcgggaaatgcatgtatgactaaa
gaaacagaaatcatctgcacaagagggggtcaaacactttggtctgatcgtatatcagga
aaagtttcggtcttagccggaaatgcaaacttttgggctgtcggatgtgaagacgggtgt
ttacaggtttatacgaagtgtggaagacgtgcattgccgaccatgatgatgggatctgct
gcaacctttatagattgtgacgagagctggaaattattattggtgacgaggaaaggatct
ttgtatttatgggatctcctgaataggacttgtctcctccgtgattcattggcatctcta
atcactttggaccataactcgtctacaaaaggcacatgcacttcatatgatcttggcaca
atcaaagttatatcggtgaagttgtcgaaatctggttttcctcttgttgttttggccact
cggcacgcgtttctctttgacacgagtctaatgtgttggctgagggtcgctgatgattgc
tttccggcatcaaattttgctagttcttggaatttgggttcaactcagaccggtgagctg
gcctcgctgcaggtggatgtcaggaaatatttggccagaaaaccgggctggagcagggta
accgatgatggagtacaaacgcgtgctcatttagaagctcaattggcatcgtctttggct
ctgaaatccccaaacgaatatcgccagagccttctttcctacatacgcttccttgcaaga
gaagcggatgagtctcgattacgagaagtctgcgaaagttttcttggtccaccaaccgga
atggcttccgattccaagaaccctacttgggatgcatatgtgctcggaatgaaaaagcac
aaacttttaagagaagacattcttccagcaatggcatcgaataggaaagtccaacgatta
cttaacgagttcatggatctcctctccgaatatgcaagtatcgaaaacaacttagaccaa
agagacccatctccactgactgtatctcaaccagagattgacctgatggactccaaccca
tctgcaacctgccaaacggataccgttgagccaacaacagataagaaggaaaacccgtcc
cccagtataatagatcaaatggattctattctatcgaatcaagtaaactcgggtaccaaa
tcttccgatcaagtaaatcaagctccaacaagcgaagatcctgctggttcataa

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