Gossypium hirsutum (upland cotton): 107932731
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Entry
107932731 CDS
T04793
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00900
Terpenoid backbone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107932731
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107932731
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
107932731
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
107932731
2.5.1.29 geranylgeranyl diphosphate synthase
107932731
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
107932731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
CdiI_2
Motif
Other DBs
NCBI-GeneID:
107932731
NCBI-ProteinID:
XP_016720307
UniProt:
A0A1U8M0J4
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All DBs
Position
A04:1809119..1810057
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AA seq
312 aa
AA seq
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MAKAFYHINGNPMFYFPSRPNPNRPFPLLLSYNKPLKVTMSCNQSYWASINEDIEAHLKQ
AIPIREPLSVLEPMHHLTFAAPRTTASALCVAACELVGGNRDRALPAASTIHLVYAASFT
HEYVPRSETSRPMSKIQHVYGPGIELQIGNAMIPFGFELLAKSDDPARNDSDRILRVMVE
ITRAIGSEGMIYGQYDEVESYQSDNNKSSHIEEIERVSEKYEGTLYACAGACGAIIGEGC
EDEIEKMRKYGLYIGKIEGIMSRIGSSSDKDLMEKLVEELRNLANNELRGFNEAKVKAIF
NTQSSPFDLCKQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagctttctaccacatcaatggcaacccaatgttttattttccctctagacca
aatcccaaccgtccatttcctttgcttttgtcttataacaagcctttgaaggttaccatg
tcatgcaaccaatcttattgggcctctataaacgaagatatcgaagcgcatctcaaacag
gctatccctatacgtgaaccgctctctgtattggagcccatgcaccatttaacgtttgct
gccccacggaccaccgcttcggctttatgcgtggcggcttgtgagttggtcggtggtaat
cgtgatcgagctttgccagcagcgtcgacgattcatctcgtgtatgcggcttcgttcacc
catgagtatgttccacggagtgaaacctctaggcctatgtccaaaattcaacatgtgtat
ggtccaggcattgagttacaaattggtaatgcaatgataccatttgggttcgagcttttg
gctaaatccgatgatccagcccgaaatgactctgatcgaattctacgtgtgatggttgag
atcacacgtgcgattggttcggaaggaatgatttacggacagtacgatgaagtggaatct
tatcaatccgacaataacaagtcgagccacatcgaagaaatcgagcgtgtctccgaaaaa
tatgaaggaacattgtatgcttgtgcgggtgcttgtggagcaataataggagagggatgt
gaagatgaaatagagaaaatgagaaagtatggtttatatatagggaaaatagaggggatt
atgagtagaattggaagcagtagtgacaaggatttgatggaaaaattggtggaggagctg
agaaatttggctaacaatgaactgagagggttcaatgaagcaaaggtgaaagcaatattc
aacacacaatctagtccatttgatctttgtaagcaatga
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