Gossypium hirsutum (upland cotton): 107933073
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Entry
107933073 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107933073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107933073
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107933073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
TFIIA
F1F0-ATPsyn_F
Med3
Motif
Other DBs
NCBI-GeneID:
107933073
NCBI-ProteinID:
XP_016720715
UniProt:
A0A1U8M1P4
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Position
A12:17980044..17983623
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AA seq
492 aa
AA seq
DB search
MSSFFATPQPQQSPPLFQPQQLQPFQQSYSPFYQSQQQQQQQQQQQQQQPQLQFPQQQQQ
QQQQQQQQQPLFLFTNDKTPASYSTKWADLHPDSQKFLLQIEERILEYRDESQRLDQCTR
LYDSSVSNEGFELDASHIVQELGGISTAMERQKALLQELMSTVKDMLRNTEVAVRSFMML
RPRFVHSNTGGASNATAPSQVPGATTRPGSGAQPTAASMVPVFDFYHGLPKKPSPFLQYT
VARFEKYLGECRQWIEELEQLLLLNSDRNSINHASSLLQSLPKVMSNVHDFFVHVAAKVE
SIHQYIESMKTAYLADHRHRGDVNDPFLEADRRETAKQEAAAKRVHPTLHLPANSQPSTQ
VAGLFASSAAPAAASAPQTSAATSAASSGGGLSLFSTPSSTPASSMSSSLFATPTTGASI
QTSLFSSSSGSLLGSASTPSLFASTVPAFGSTASAGGSLFSTPFASGAPTGSGASFGAAS
KSSRPKSRTARR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgttctttgcaactccacaaccccaacaatctccgccattgtttcagccccaa
caactacaacctttccagcaaagctacagccctttttatcaatcccagcagcagcagcag
cagcagcaacaacaacaacaacagcaaccacaattgcagtttccacaacagcagcagcag
cagcaacaacaacagcagcagcaacaacccctttttctttttactaatgacaagactcct
gctagttacagcaccaaatgggctgatctccatcctgattctcaaaaatttctgcttcaa
attgaggaaaggatattggagtatagggatgaaagccaaaggttagaccagtgtactcgc
ctttatgattcttcggtgtccaatgaaggcttcgagcttgatgccagccacattgttcag
gaacttggaggaatcagtactgccatggagaggcagaaagctttgctgcaggaattgatg
agtactgtgaaagatatgttaaggaacacagaggttgctgttcgttctttcatgatgctt
cggccacggtttgttcattcaaacacaggaggtgcttcaaatgccactgcaccatcccag
gttccaggggcaacaacaagaccaggttctggtgctcaaccaactgctgcatccatggta
ccagtttttgatttttaccatgggcttccaaagaagccttctccctttctacagtataca
gttgctagatttgagaagtatttgggtgagtgccgccaatggattgaagagttggaacaa
cttctccttttgaattctgatagaaactctatcaatcacgcatcctctttattgcaatct
cttccaaaagtcatgtccaatgtgcatgacttttttgttcatgtggctgccaaggtggaa
agcattcatcaatatattgaatcaatgaaaacagcttatcttgctgatcaccgtcacaga
ggagatgttaatgatccttttcttgaggctgataggagagaaactgccaaacaagaagct
gctgctaagagggtacatccaaccttgcatttacctgcaaattcacaaccgtcaactcaa
gttgctggcttgtttgccagctcagcagctcctgctgcagcctctgccccacagacttct
gcagcaacatcagcagcttcctcgggaggtggattgtctctttttagtacaccgtcctct
actcctgcttcttccatgtcatcttctctgtttgcaactccaactacaggtgcttccatc
caaacatcccttttcagttcttcatcaggatctctcctaggatctgcatccactccctct
ctttttgctagtaccgtaccagctttcggctctactgcatctgctggaggttcacttttt
tcaacaccatttgcatctggtgctccaacaggatctggtgctagctttggggctgcatct
aaatcatcaaggccgaaatctcggactgcccggcgttag
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