Gossypium hirsutum (upland cotton): 107933097
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Entry
107933097 CDS
T04793
Name
(RefSeq) chloride channel protein CLC-d isoform X2
KO
K05016
chloride channel 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107933097
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107933097
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107933097
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107933097
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
107933097
Ion channels [BR:
ghi04040
]
Chloride channels
Chloride channel (CLC)
107933097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
107933097
NCBI-ProteinID:
XP_016720738
UniProt:
A0A1U8M502
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All DBs
Position
A01:2265147..2274617
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AA seq
802 aa
AA seq
DB search
MLSNHFENGMDMARLAWSRLPHSEDGELDGVGLLSTSSNRNGVESLDYEVIENYAYREEQ
AQRGKFFVGYNVAVKWFFALLIGIGTGLAAVFINISVENFAGWKFALTFNIIQKSYLAGF
LMYILINLALVFSSVYIITHFAPAAAGSGIPEIKGYLNGIDIPGILLFRTLIGKIFGSIG
SVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQGFKSDRDRRDLVTCGCAAG
VAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRVAMGWCKSGNCGHFGAG
GFIIWDISDGQEDYSFEELLPMAVIGIIGGLLGALFNQLTIYVTRWRRNYLHKKGNRVKI
YEACLISVLTSVISFGLPLLRNCSPCPDSDPGSEIECPRAPGADGNYVNFYCGKDKEYND
LATIFFNTQDDAIRNLFSAKTIHEFSAKSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMI
GSTYGRLVGIFTVNHYKKLNIDEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLP
LIMLVLLISKAVGDVFNEGLYDEQARLRGIPLLESRPKYVMRKMTAREACGNQKVLSLPR
VVKVADAVSILRSNKHNGFPVVDHTRDGEPLVIGLMLRSHLLVLLQSKIDFQHSPLPSHS
RSGSGAIRHNFSEFAKPVSSKGISIDDIYLSSEDLEMYIDLAPFLNPSPYVVPEDMSLTK
VYNLFRQLGLRHIFVVPRASRVIGVITRKDLLIEEESEDSATMELQSTSVRDQRHKTRLL
EENGADAERPLLNGLLVQNQSF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgaatcattttgaaaatggaatggatatggcgaggcttgcttggtcccggctt
ccacattcagaagacggtgagcttgacggagtcggattattgagtacttcaagcaatagg
aacggcgtcgagagccttgattacgaagttattgaaaattacgcctatcgagaagaacag
gctcaaagaggaaagttttttgttggatataacgtggccgttaagtggttcttcgctttg
ctcatcggcatcggtactgggttagctgctgtatttatcaatatttctgtcgagaacttt
gctggatggaagtttgcattgacttttaacataatacaaaaatcatatctggctgggttt
ttaatgtacatcttaatcaacttagctttagtcttttcttctgtatatatcatcacccac
tttgctccagcagcagcaggatctggtattcctgaaatcaagggttatttgaatggaatt
gatattcccggtatccttcttttcagaactttgattggaaagatatttggaagtattggt
tcagttggaggtggtttagctctgggcaaagagggacctcttgtccatactggtgcttgt
attgcttctttacttggacaaggtggatccacaaaataccatctaagttccaggtggctt
caaggtttcaagagcgatcgggatcgccgtgatcttgtgacctgtggctgtgcagctgga
gttgctgctgcttttagagctccagttgggggtgtattatttgcattggaggaggttaca
tcttggtggaggagtcaactaatgtggcgtgtctttttcacttctgcggttgtggctgtt
gtggtgcgtgttgctatgggatggtgtaaaagtggaaactgtggacattttggtgctggt
ggctttattatatgggatatatcagatggtcaagaggactattcttttgaggaattattg
ccaatggcagttattggaatcattgggggtctactaggagctttgtttaaccaacttact
atttatgtaactcgctggcgtcgtaattatttgcacaagaaagggaatcgagttaagata
tatgaagcttgccttatctccgttttaacgtcagttatatcttttggactaccgctacta
agaaactgcagtccatgccctgactcagatcctggctctgaaattgaatgtccaagggct
cctggagcggatgggaattatgtgaatttctactgcggtaaggacaaggaatacaatgat
cttgcaactattttcttcaatactcaggatgatgccatcaggaatttgtttagtgcaaaa
acaattcatgagttcagtgctaaaagcttgttgacatttttggttatgttttacacctta
gcagtagtaacatttggtactgctgttccagctggtcaatttgttcctggaataatgata
ggatcaacgtacggccgtcttgttggtattttcactgttaaccattacaagaagctcaac
attgacgagggaacatatgcgcttttaggagctgcttcatttcttgggggttctatgcgt
atgacagtatctctgtgtgtcataatggtcgaaatcacaaataacttgaaacttttacct
cttattatgcttgttcttctcatatctaaggctgttggtgatgttttcaatgaaggttta
tatgatgaacaagcacgattgaggggcattccgttgctggaatcaagacccaagtatgtg
atgcggaaaatgactgccagggaagcctgtgggaaccagaaggttctttcgcttcctcgg
gttgtaaaggttgcagatgctgtttccattttgcggagcaataaacataatggctttcct
gtggttgatcacacgagagatggagaacctcttgttattggacttatgcttcgaagtcac
ctactggtacttcttcaatccaagattgatttccagcatagtcctttaccttctcattcc
agaagcggatccggagcaattaggcataatttcagtgaatttgctaaacctgtttcgagt
aaaggaatatcaatagatgatatttatcttagttcagaggatttagaaatgtacatagat
cttgcaccatttttgaatccttcaccgtatgtagtacccgaagatatgtctttaaccaag
gtctacaatcttttccgccaactaggattgagacacatatttgttgttcctcgtgcatct
cgagtgattggtgtaatcactagaaaggatctgctgattgaggaggaatctgaggattca
gctacaatggagctccaatcaactagtgtaagagatcagcgacataagacaagattgttg
gaagagaatggtgcagatgcagaacggccacttctgaatggtcttttggttcaaaatcaa
agtttttag
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integrated database retrieval system
