Gossypium hirsutum (upland cotton): 107933108
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Entry
107933108 CDS
T04793
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107933108
00071 Fatty acid degradation
107933108
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107933108
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107933108
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107933108
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107933108
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107933108
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
107933108
Exosomal proteins of breast cancer cells
107933108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107933108
NCBI-ProteinID:
XP_016720748
UniProt:
A0A1U8M511
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Position
D01:1885296..1893915
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AA seq
697 aa
AA seq
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MDSSSAERRLNAIHGHLVPVVCGGAGSHSGLRVNPTAGEFLCEQGYSVVLPEKLKTGKWN
VYRSARSPFKLVTRFPDHPDIGTLHDNFIHAVDTFRDYKYLGTRIQADGTVGEYKWMTYG
EAGTARAAIGSGLIYHGIPKGSCIGLYFINRPEWLIVDHACSAYSLVSVPLYDTLGPDAV
KYIVNHADVKAIFCVPQTLNSLLNFLSEIPSVRLVVVVGGKENEVPSLPPSTGIQIVTYT
KLLSQGRRNLQPFSPPKPDDVATICYTSGTTGTPKGVVLTHGNLIANAAGCSTGTKFYPS
DVYISYLPLAHIYERAYQVALLYFGVAVGFYQGDNMKLMDDLVALQPTIFCSVPRLYNRI
YAGIVNAVKTSGPLKERLFNAAYNSKKHAIMNGKSPSPLWDKLVFNKIKAKLGGRIRFLS
SGASPLSPDVLDFLKICFGCRVVEGYGMTETSCVISSMEEGDNLSGHVGSPSPACEIKLV
DVPEMNYTSDDQPYPRGEICVRGPIVFQGYYKDEVQTREVLDEDGWLHTGDIGLWLSGGR
LKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSLNSSLVAIVSVDHDVLK
AWAASEGIKYKDLGQLCNDPRARAAVLADMDALGREAQLRGFEFAKAVTLVLEPFTMENG
LLTPTFKIKRPQAKEYFAKAISNMYAELATSDPSPKN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggattccagctcagctgaacgtcgacttaacgccattcacggtcaccttgtccccgtc
gtatgcggaggcgccggttctcattcgggcctccgtgttaacccaaccgccggcgagttc
ctctgtgagcagggttatagtgttgtgctgccagagaaactgaagacaggaaaatggaat
gtatacagatctgctcgctctccgtttaagcttgtgactagatttcctgatcatcctgat
attggtacactgcatgataattttatacatgcggttgataccttccgagattacaaatat
cttggtacaagaattcaagcggatggtacagttggagagtacaagtggatgacatatgga
gaagctggaactgctcgggcggccataggttctggcttaatatatcatggaataccaaag
ggctcttgtattggattatatttcatcaatagaccagagtggctcattgttgatcatgct
tgctctgcgtattcccttgtgtcagttcctttatatgacacactaggtccggatgctgtc
aagtacattgttaatcatgcagatgttaaagctatattttgtgtgcctcaaacattgaat
tctttgctaaactttttatctgagattccatccgtacgtttggttgtggtggttggaggg
aaggaaaatgaagtgccttcattgccaccgtcaactggaattcagattgtgacatataca
aaattattaagtcagggtcgccgtaacctccagcctttttccccaccaaaaccagatgat
gttgcaaccatttgctacactagtggtacaactggaacacccaagggagttgtgctgacc
catggaaacttgattgcaaatgctgctggatgcagcactggtacaaaattttacccctca
gacgtgtacatatcatatcttcctttggcacacatttatgaacgagcttatcaggttgct
ttactgtatttcggagttgcagttggattctaccagggggataacatgaaattaatggat
gacctggttgcactacaacccacaatattttgcagtgtccctagactgtataacagaatt
tatgccggtattgtcaatgctgtgaagacttctggtcctctgaaggagagactttttaat
gccgcctacaattccaagaagcatgcaataatgaatggaaagagtccttctcccctgtgg
gacaaattggtgttcaacaaaataaaagccaaactcggaggacggattcgtttcttgagt
tcaggtgcttcacccttgtctcctgatgtcctagacttcttgaagatttgctttggctgt
cgagtcgtggaaggttacggaatgaccgagacatcatgtgttataagcagtatggaggag
ggtgacaatctttccggccatgttggctctcctagtccggcttgtgaaataaagcttgtg
gacgtcccggaaatgaactacacatctgatgatcagccatatcctcgtggagaaatctgt
gttaggggtccaattgttttccaaggatattacaaggacgaagtgcagacgagagaggta
cttgatgaagacggatggcttcatactggagacatagggctatggttatctggaggtcgg
ctaaagattatcgataggaagaaaaacatttttaagctggctcagggagagtacatagct
ccagaaaaaatcgaaaatgtatatgctaaatgcaaatttattgcacagtgttttatttac
ggtgacagcctgaattcttcattagtagctattgtctcagtggaccacgatgttttgaaa
gcatgggctgcgtctgaaggcattaagtacaaagatttaggacaactatgcaatgaccca
agagcaagggctgctgtcctggctgatatggatgctctcggaagagaagctcagctgcga
ggcttcgagtttgcaaaagctgtgaccttagtgcttgaaccattcacaatggagaatggt
ttgcttactccgacttttaagattaagagaccgcaagcaaaggaatacttcgcaaaagcg
atttcaaacatgtatgccgagctcgctacatcggatccttctcctaagaactag
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