Gossypium hirsutum (upland cotton): 107933369
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Entry
107933369 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
107933369
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-5
107933369
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
107933369
NCBI-ProteinID:
XP_016721047
UniProt:
A0A1U8M2N5
LinkDB
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Position
A04:88214204..88222403
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AA seq
1365 aa
AA seq
DB search
MAGGSAFDALADDDDRMEVNEENDEDVVAKALKGKKKKSKGGKKGGNRFAAAALDEFDEE
FSVKVDEMKAEEEDVPSISFSDKKKKSKSSKKSGKAIGGSAFDAIAAEDDDGEVVDDGGD
VSKEESKVEVDDDDGDDLIAKAFAGKKKSKGGKKGGGSRFTAMVLDELGDEEGAKEDVED
DVPVFPSSDKKKKSKSSKKVGNPSSAPALDELESDSELKEHEEDDVPSFSFSDKKKKSKS
KSSKKSGNSFSAALLDDEDEGDASVPESTGAAAIDDYDDNTSMVAFSGKKKKSSKKKSSA
AFAALGDEAELQSEVSDMVETELSSLGTRNVEAVDSKTNNKSEEAVETSKNKKRNKKKNK
SGRTAQEEEDLDKILAELGEGPAVTKPITAAPPQEEKAQVQPEPEPEPEPVIAADATGEK
EGEDEPAESAAAKKKKKKKEKEKEKKAAAAAAAVKEEETKTETSDAKKKDAKSKAADKKL
PKHVREMQEALARRKEAEERKKKEEEERLRKEEEERRRQEELERQAEEAKRRKKEREKEK
LLKKKQEGKLLTGKQKEEARRREAMRNQILANAGGLSLPTADKEGAPTKRPIYQTKKSKS
VQHANDAASTKPEENTQSKAKEQEESETKVELESVDDEKVDEVESNNTEDKSVVADAAEG
NGMEEEDDDDGEWDEKSWDDVNLNIKGAFDDEEADSVPKPAVQKDIKSAPLASRNAAPPA
VAKPMVEAKKPVTSQSNTSQPEVKSTDKNLKKNTAVQNKVPKSDASPKQSEDLRSPICCI
MGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAANIRERTKELKADATLKVPGL
LVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRKTEFIIALNKV
DRLYDWKARRNSPIGMTLKKQTKDVLSEFNRRVTYVITQFKEQGLNTELYYKNKEMGETF
SIVPTSAVTGEGIPDLLLLLVQWTQKTMVEKLTFSDEVQCTVLEVKVIEGLGTTIDVVLV
NGVLHEGDQIVVCGLQGPIVTTIRALLTPHPMKEIRVKGAYMQHKEIKAAQGIKIAAQGL
EHAIAGTSIYVVGPDDDLEDIKEAAKEDMQSVMSRIDKSGEGVYVQASTLGSLEALLEFL
KTPEVNIPVSGIGLGPVHKKDVMKASVMLEKKNEYATILAFDVKVTPEARELADELGVRI
FIADIIYHLFDQFKAYIDGLKEERKREAADEAVFPCVLKILPNCIFNKKDPIVLGVDILE
GILRVGTPICIPQREFIDIGRIASIENNHKPVDSAKKGQKVAIKIVGSNTEEQQKMYGRH
FELEDELVSHISRRSIDILKANYRDDLTLDEWRLVQRLKILFKIP
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggctggagggtcggcttttgatgctcttgctgatgatgatgatcggatggaagtgaat
gaggagaatgatgaggatgtggtcgctaaagctttgaaaggcaaaaagaagaagtctaaa
gggggaaagaagggtggaaataggtttgcagcggctgcactcgatgaatttgatgaggag
ttcagtgtgaaagtcgatgagatgaaagccgaggaagaagatgttccttcgatttctttc
tcggataagaaaaagaaatccaaatcgtcaaagaagagtgggaaagctattggagggtca
gcttttgatgcaattgctgctgaagatgatgatggggaggttgttgatgatggtggcgat
gtttcaaaggaagagagcaaggttgaggttgatgatgatgatggtgatgatttgattgct
aaggcttttgcgggaaagaagaagtccaagggtgggaaaaagggcggtggaagtaggttc
actgccatggtactcgatgagcttggtgatgaagaaggcgccaaagaggatgtggaagat
gatgttcctgtgtttccttcatcagataagaaaaagaagtcgaagtcttctaagaaggtt
ggtaatccatccagtgcccccgcacttgatgaacttgaaagcgattcggagttgaaagag
catgaggaagatgatgttccttctttttctttctcagataagaaaaagaagtcaaaatca
aagtcttctaagaagagtggtaattctttcagtgcagcattgcttgatgacgaagatgaa
ggagatgcttcagtacctgaatccactggtgccgctgctattgatgattacgatgacaat
acttccatggttgcattttcaggtaagaaaaagaagtcatccaagaagaaaagtagtgcc
gcatttgcagccttgggtgatgaggcagagctgcaaagtgaagtttcagacatggttgaa
accgaactatcaagtttaggaactagaaatgttgaagctgttgattctaaaaccaacaac
aagagtgaagaggctgtggaaacttcgaagaacaagaagaggaacaagaagaagaataag
agtggaaggactgcacaagaggaggaagatttggataaaattcttgctgaacttggtgag
gggcctgccgtaacaaaacccataacagcagcccctccccaggaggagaaagcccaggtt
cagccagagccagagccagagccggagccagttatcgctgctgatgctacaggtgagaaa
gaaggtgaggatgaacctgcagagtctgctgcagcaaagaagaagaaaaaaaagaaggaa
aaggaaaaggagaagaaggcggctgcagctgcagcagcggttaaggaagaggaaacgaaa
acagagacctctgatgccaaaaagaaagatgctaagagtaaagctgctgacaagaaacta
ccaaagcatgttagggagatgcaggaggcacttgctaggagaaaagaagcagaagagagg
aagaaaaaggaagaagaggagaggttgaggaaggaagaagaagagcgacgtcgacaggaa
gagcttgagcgacaagcagaggaggctaagcgtaggaagaaggaaagggaaaaggagaag
ctcttaaagaagaagcaggaagggaagttgttgactgggaagcaaaaggaagaagctcgc
cgccgggaggcaatgaggaaccagatattggccaatgccggaggcttgtctttgcctact
gcagacaaagaaggtgcacctacaaaacgacccatatatcaaacaaagaagtctaaatca
gttcaacatgctaatgatgctgcttctactaagccggaggaaaatactcaatcaaaggca
aaagagcaagaagagtcggaaaccaaggttgagttggagtcagtggatgatgagaaggtt
gatgaagtagaatcaaataacacagaagataaatctgtagttgcggatgctgctgaaggg
aatggaatggaagaagaagatgatgatgatggtgaatgggatgaaaagagttgggatgat
gttaatcttaatatcaagggtgcctttgatgatgaagaagctgattctgtgcccaagcct
gcagtgcagaaagatataaagagcgctccactggcttcacggaatgcagcccctcctgca
gttgccaagccaatggttgaggccaagaaaccggtgacttcccaatcaaatacatctcag
ccagaagttaaatctacagacaagaacttgaagaaaaatactgctgtgcaaaataaggta
ccaaaatcagatgcttctcctaagcagagtgaagaccttcggtccccgatttgctgcatt
atggggcatgttgatactggtaaaacaaagctgctggattgcatccgaggcactaatgtt
caagaaggtgaggctggtggtattacacaacagattggtgcaacatattttcctgctgct
aacatacgggagagaacaaaggaattgaaggctgatgccacactgaaggttccgggctta
ttagttattgatacccccggtcacgaatcctttacaaatcttcggtcaaggggatcaggg
ttatgtgatattgccatcttggttgtcgacattatgcatggtttagagccacagacaata
gagtccctcaatcttttgaaaatgaggaaaactgagttcattattgcattgaataaggta
gacaggctttatgactggaaagctcgtcgcaattcaccaattgggatgacacttaagaaa
caaactaaagatgttctatccgaattcaataggagagttacatatgttataactcagttc
aaggagcaagggttgaatactgaattgtattacaaaaataaggaaatgggtgaaactttc
agcattgtgcctacaagtgcagtcactggagaaggcatcccagatttgttattattactg
gtccagtggacccagaaaacaatggttgaaaaacttacattcagtgatgaagtgcagtgt
acggtcttggaagtgaaggtcattgaagggcttgggacaactattgatgttgtgttggtt
aatggtgttcttcatgaaggagatcaaattgttgtttgtggcttgcagggccctattgtc
accactatcagagcattgttgacaccccaccctatgaaggaaatccgagtgaagggagcg
tatatgcagcacaaggagatcaaagcagcacagggtatcaagattgctgcacagggcctt
gagcatgctattgctggcaccagcatctatgttgtaggtcctgatgatgatttggaagat
atcaaagaggcagcaaaggaagatatgcagtcagtcatgagtaggattgacaaaagcggg
gaaggggtttacgtacaagcatctacccttggctctttggaagcattgctggaatttctg
aaaactccggaagtaaatattcctgttagtggtataggcttaggccctgtacacaaaaaa
gacgtaatgaaggccagtgtcatgcttgaaaagaaaaatgagtatgctactattttggct
tttgacgtcaaggtgaccccggaggcacgagaactagcagatgaattgggtgtgaggatt
tttattgctgatatcatttatcacttattcgaccaattcaaagcatatattgatggtctc
aaagaggagagaaagagggaagcagcggatgaagcagtcttcccttgtgttttgaagatt
ttacctaactgcatttttaacaagaaggatccaattgtcttgggggtggatatccttgaa
ggcattttaagggttgggacgccaatttgtattcctcaaagagaattcattgatattggt
cgaatagcttcaattgagaataaccataaaccagttgattctgccaagaaaggccagaag
gtagccattaagatagttggatccaataccgaggagcaacagaaaatgtatggaaggcat
tttgagcttgaagatgagcttgttagtcatatttctagaagatcgatcgatattctcaaa
gctaattatcgggatgatctgacccttgatgaatggaggttggttcaaaggctgaagatc
ctcttcaaaattccttga
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