Gossypium hirsutum (upland cotton): 107933392
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Entry
107933392 CDS
T04793
Name
(RefSeq) KH domain-containing protein At1g09660/At1g09670 isoform X1
KO
K14945
protein quaking
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107933392
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107933392
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
107933392
NCBI-ProteinID:
XP_016721084
UniProt:
A0A1U8M6C6
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All DBs
Position
A04:87784258..87787164
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AA seq
300 aa
AA seq
DB search
MMGERISPGSYFQYPPPGFPSVSPHRPSSIPTDRERYLAELFTEKEKLGPFTQVLPQCTR
LLNQEIRRVSGFSSSLLDHERFEHDSPIRSFGHHPNGRQMDLEGWSIMQTEENGHLQRVA
PVQAASMGWPGLPGAPTTPIVKKVVRLNVPVDQYPSYNFVGRILGPRGNSLKRVEAVTEC
RVYIRGKGSVKDSVKEEKLKDKPGFKHLNEPLHVLVEAELPEDVINSRLDYAVAILENLL
KPVDESLDNYKKQQLRELALLNGTLREESPKMSPTMSPSMSPFDGTGMKRANYFSQKPLI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagaaagaatctcaccagggagttattttcaataccctccacctggtttccct
tctgtttctcctcatagaccttcatctattcctacagatcgtgaaagatacttagctgaa
ttattcacagagaaagagaagttgggacctttcacacaagttcttcctcaatgcaccagg
cttcttaatcaagagatcagaagggtctcaggttttagttcgagtttattggatcatgag
agatttgagcatgatagtcctattaggtcatttggtcatcatcccaatggaagacaaatg
gatttggaaggatggtccataatgcaaacagaggaaaatgggcatctgcaacgagttgct
ccggttcaagctgcatcaatgggttggcctggtttgccaggagctccaacaacaccgatt
gtaaagaaagttgttagactcaatgtacctgtggatcaatatcctagttataattttgtt
ggtcgaatattgggaccacgaggaaactccctaaagagagttgaagctgtgactgagtgt
agggtgtacataagaggcaaaggttctgtcaaagattctgttaaggaagagaaactaaaa
gataaacctggattcaaacaccttaatgagccgttgcatgtgttggtggaggctgaactt
cccgaagatgtgataaattctcgtttggactacgctgttgccatactagaaaatcttctg
aaacctgtggatgaatccttggataactataagaaacaacagcttagggagttagcttta
ctaaatggtacattaagggaagagagtccgaaaatgagcccgactatgagccctagtatg
tcaccctttgacggtactggaatgaaacgagccaattattttagccaaaaacctctaata
tag
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