Gossypium hirsutum (upland cotton): 107933405
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Entry
107933405 CDS
T04793
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00730
Thiamine metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
107933405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107933405
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
107933405
Ribosome biogenesis [BR:
ghi03009
]
Prokaryotic type
GTPases
107933405
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_29
AAA_21
AAA_16
nSTAND1
AAA_23
AAA_22
Septin
Adeno_IVa2
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
107933405
NCBI-ProteinID:
XP_016721100
UniProt:
A0A1U8M2S0
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Position
A04:88264140..88269026
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AA seq
481 aa
AA seq
DB search
MPITSFSLFRSRLPAITTVLRRHSPPYRHLFIVSAKQTPSNPRQSVSKKPQPNKNLLKAK
HTFKDYSSLAPVLAPNETPSLSDSQAVGAVAAAQANFMRVIVQREPEDGMKTGLELLCVV
RAVLKKIKRRVLVGDKVVVGSIDWVERRGVIENVFQRSSEIVDPPVANVDRLLVLFSMEQ
PPVEPFMLTRFLVEAESYRIPLTLALNKTELVDEETLFAWKNRLRSWGYEPVFCSVETKN
GLDSLAFYLRDLTTVIVGPSGVGKSSLINVLRSDHRATDSLEGDNLFDPISGSKWFEDQR
VGEVSTRSGRGKHTTRHVSLLPLLGGGYVADTPGFNQPSLLKVTKQSLAQAFPEIRKMLK
DSEPAKCSFNDCLHLGEPGCIVKGDWERYPYYFQLLDEIRIREEFQLRTFGTKREGDVRY
KVGDMGVQQAEPRLEPKKHRRQSRKRINQSLLDELDELEDDDDSLDLENDPIIRAIENEN
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcacttcattttcactgttccgcagccgtttacccgccataaccaccgttctc
cgccgtcactcaccaccctaccgccacctctttatcgtctccgccaaacagaccccttcc
aatccaagacaaagcgtatccaagaaaccccaacccaacaagaatctcctcaaggctaaa
cacaccttcaaagattactcctccttagctcccgtccttgcccctaatgaaactccatct
ctttccgattctcaagccgtcggcgccgttgccgctgcccaagccaatttcatgcgggtc
atagttcaacgggaaccggaggatggtatgaaaactgggttggagttgctttgtgtggtg
agggcagttttgaagaagataaagaggagggttttggttggggataaggtggtggttggt
tcgattgattgggtggaacggcgtggggttattgagaatgtgtttcaacggagttctgag
attgttgatccgccggttgctaatgtcgatcgcttgctcgtgcttttctctatggaacag
ccgccggtggagccgtttatgcttacgagattcttggttgaagctgagtcttataggatt
ccactcacgcttgctttgaacaaaacggaactcgttgatgaagagactcttttcgcatgg
aagaataggttgcgaagctggggctatgaaccggtcttttgcagtgttgagaccaaaaac
ggacttgattctcttgcattttacttgagggatctaacaactgtaattgttggtcctagt
ggggttgggaaatcaagccttatcaatgttcttcgaagtgatcaccgcgctactgattcc
cttgaaggagataatttgtttgatcccatttcaggcagcaagtggtttgaagatcagagg
gttggggaggtctcgacaagaagtggcagagggaaacacactacgcgacatgtttcgttg
cttccactattgggagggggctatgttgccgatactccggggtttaatcaacccagcttg
ttgaaagtgacaaagcaatctcttgcacaagcttttcctgagattcggaaaatgctaaaa
gacagtgaacctgcaaaatgctcattcaatgattgcttacatcttggtgaacctgggtgc
attgtgaaaggggattgggaaagatatccatactatttccaacttctcgatgagatccga
atcagagaggaatttcagttgaggacattcgggaccaagagagaaggtgatgtcaggtac
aaagtgggagatatgggtgttcagcaagctgaacctcgattggaaccgaagaaacatcga
aggcaatcgcggaaaaggattaatcagtcgttattagatgaattagatgaacttgaggat
gatgatgatagcttagacttagaaaatgacccaattattagagcaatagagaatgaaaac
cagtag
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