Gossypium hirsutum (upland cotton): 107933515
Help
Entry
107933515 CDS
T04793
Name
(RefSeq) structural maintenance of chromosomes protein 6B isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107933515
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107933515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
SMC_hinge
AAA_21
Nuf2_DHR10-like
ACBP4_C
Sec3_CC
Sipho_Gp157
ABC_tran
MC7
Motif
Other DBs
NCBI-GeneID:
107933515
NCBI-ProteinID:
XP_016721233
UniProt:
A0A1U8M6D4
LinkDB
All DBs
Position
A12:101455319..101469372
Genome browser
AA seq
1112 aa
AA seq
DB search
MDKSGAPPFLSRLKHLPISRVKGKLPCTVFVQNFNFSVSRDSRVLVVGRPQDTTMSSSRV
FSGQMYGAQRSGAGTIRRIRLENFMCHSSLEIELGEWVNFITGQNGSGKSAILTALCIAF
GCRARETQRASKLKEFIKTGCSYATVQVDIKNEGVDSFKPEIFGDTIIIERRISDTTSST
VLKDRQGRKVASRKEDLRELVEHFNIDVENPCVIMSQDKSREFLHSGNDRDKFKFFFKAT
LLQQVDELLQSIIKQLKDACALVDELEKLIRPAQLELSELQEKIENIKRVEQILQEVQLL
RKKLAWSLVYDEDKRLQEQAKNIETLKKRIPTCQAKIDSTLDKLEKLLERLSKKKVQVAS
LVEKTSEVKRKKDELWDALCSARKEKLELEEEHRRGTKQIHKMRNDVRRLEEQARDIQDK
HIRNTQAEESEIEEQIKELEYAVDNVQSLLSSLKDEENTLSEQISAEMDAMKKINDEINY
YERKQREVHHQICELRLHQTNKVTAFGGDGVLRLLREIERHHKAFSMPPIGPIGAHVTLV
NGDTWAPAVERAIGKMLNAFIVTNSEDACALRKCAREARYNFFPIVIQRFSRPRLIIPNH
SLPQTSHPTTLSVLHSDNPTIYNVLVDVCKAERQVLVKDYNMGRAVAFDQRIPNMLEVFT
LDGFKMFSRGSVQTVLPINKNLKIGRLRGSFGDQVKEFESHVSNIQQDIDQRKSRKRELE
KKVQDFNRKLDNKKKRRLDVEREFMAKRMKLQDMQKSHAVDASLLPESTTNELLQEISDG
KMVIKKKEALLEALKDRINEAEEKARTLKLSFEDLGESTKGEVEAFQKAEEELTEIEKEI
HNAEANKLHYENIMNNKVLPQIKEAEAKYLELEKDRKESYKKASVICPESDIEALGDRDE
TTTEQLDAKLKRLNQRLMHESQQYSESIDDLRMLHQEKERRILRELHTYKAFRERLDACQ
KALDLRWKKFQRSASLLRRELTWQFNGHLGKKGISGHINVSYEEKTLSVEVKMPQDASST
IVRDTRGLSGGERSFSTLCFALALHDMTEAPFRAMDEFDVFMDAVSRKISLDTLVEFALA
QGSQWIFITPHDISNVKNGERIKKQQMAAPRL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagtggtgcacccccttttctttcccgccttaaacacctccccatctcaaga
gtcaagggcaagttgccttgtactgtcttcgttcagaactttaatttttccgtttctcgt
gattctagggttttggtggtcgggagaccccaggatacaaccatgagtagttctagggtt
ttttccggtcagatgtatggcgctcaacgatccggggcgggtaccattaggaggatccgg
ttagagaacttcatgtgccacagtagtctcgaaatcgaactcggcgagtgggttaatttc
atcaccggtcaaaacggaagcgggaagagcgcgatactgaccgctttatgtatcgcgttt
ggctgccgcgctagagaaactcagagagcgtctaagttgaaggaattcataaaaactggt
tgcagttatgctacggttcaagtggatatcaaaaacgaaggagttgattcttttaagcca
gaaatttttggtgataccataattattgaacgcaggatttctgacactacgagttccact
gttttgaaagatcgacaaggtagaaaagttgctagccgcaaagaggaccttcgtgagctg
gttgaacatttcaatattgacgtcgagaatccgtgtgttattatgagtcaagacaaaagc
agggagtttttgcactctgggaatgacagagataaattcaagttctttttcaaggctacg
cttcttcaacaagttgatgagcttttacaaagtattattaaacaattgaaggatgcatgt
gctcttgtagatgagttggaaaaattgataagacctgcacagcttgaattgagtgaactg
caagaaaagattgaaaacataaagcgtgtagaacagattttacaggaggtgcagctgtta
aggaaaaagcttgcttggtcattggtgtatgatgaagataagcgtttacaagagcaagca
aagaacattgaaacgctgaaaaagcgcattcccacttgccaggctaaaattgattcaaca
ttagataaattggagaagttgttggaacgcctttcgaagaagaaagttcaagttgcttct
ttggtggagaaaacatctgaagtgaaaagaaagaaagatgaattgtgggacgctctttgc
tcggcaaggaaagaaaagcttgagcttgaagaagagcatcgccgcggcactaagcaaatt
cacaagatgaggaatgatgttaggaggcttgaagagcaagcccgtgatattcaggataaa
catattagaaacacacaggctgaagaatcagaaatagaagagcagattaaggaactggaa
tatgctgttgataatgtccagtcattgctctctagtttgaaggatgaggagaatacttta
tcagaacagatttcagcagaaatggatgcaatgaagaagattaatgatgagataaattac
tacgaaagaaagcagcgtgaagttcatcatcaaatttgtgagctccgtctacatcaaacc
aacaaggtcactgcctttggtggtgacggagtgctacgtcttctacgtgaaattgagagg
catcacaaggcatttagcatgccaccaattggtccaattggtgctcatgtgacattggtc
aatggtgatacatgggctcctgctgttgaacgagctattgggaagatgctaaatgcattc
attgttacaaattctgaggatgcttgtgctcttagaaaatgtgcaagggaggcaagatat
aacttctttccaattgtcatacagaggttttcaagaccaaggttgataataccaaatcat
tcactcccccagacgagccacccaactactctatctgttttacattcagataatcctacc
atctacaatgtcttggtagatgtgtgtaaagctgagaggcaagttcttgtcaaggattac
aatatgggaagagctgttgcatttgatcaaagaataccgaatatgttggaggtttttacc
ctagacgggtttaaaatgttttcacggggttcagtccagacagttcttcccataaacaaa
aatcttaaaattggccgtcttcggggttcttttggcgatcaagttaaggagtttgaaagt
catgtgtcaaatattcaacaagatattgatcagcgcaaaagtaggaagagggagctagag
aaaaaggttcaggattttaacaggaagctggataataagaagaaaaggcgcttggatgtg
gaacgggagttcatggctaagagaatgaaactgcaggatatgcagaagtcacatgctgtt
gatgctagtctgttgcccgagtcaactactaatgaacttcttcaagaaatttcagatggt
aaaatggtgatcaagaagaaggaagcattgctagaagcacttaaagataggatcaatgaa
gcagaagaaaaggccagaactcttaagttatcatttgaggatttaggggagtcaacaaag
ggggaggttgaagcctttcagaaagcagaggaggagttaacagagatagagaaagaaata
cacaatgcagaagcgaataagctccattatgaaaatattatgaacaacaaggttcttcct
caaatcaaggaggcagaggcaaaatatctggaacttgaaaaggatcgtaaggagagctat
aaaaaggcttctgttatttgccctgagagtgatattgaagctttaggagatagggatgaa
accacaactgagcaactggatgctaagctgaagagactgaatcagagacttatgcatgag
agccaacaatattcggaatcgattgatgatcttaggatgttgcatcaggagaaagagcgt
agaattttgagggaactgcatacttataaagcttttcgagaaagattagatgcttgtcaa
aaagctctcgacttgcgttggaaaaaatttcaacgtagcgcatcacttctgagacgcgag
ttgacttggcaattcaatggccatttgggaaagaaaggtatcagtggacacattaatgtt
agttatgaagaaaagaccctttcagtagaggttaaaatgcctcaagatgcatcaagcacc
atcgttcgtgatacaagagggctctcaggaggagagcgatccttctcaacattatgtttt
gcgttggctcttcatgatatgactgaagccccatttcgagctatggatgagtttgatgtg
ttcatggatgctgttagccgaaaaatcagcctggacacgttagtcgagtttgcattggct
caaggatcccaatggatatttatcacacctcatgatatcagcaatgtgaagaatggagag
aggataaagaaacagcagatggcagctcctcgcttatga
DBGET
integrated database retrieval system
