Gossypium hirsutum (upland cotton): 107933654
Help
Entry
107933654 CDS
T04793
Name
(RefSeq) protein argonaute 1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107933654
03036 Chromosome and associated proteins [BR:
ghi03036
]
107933654
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107933654
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107933654
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107933654
microRNA pathway
RISC loading complex
107933654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Gly-rich_Ago1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107933654
NCBI-ProteinID:
XP_016721400
UniProt:
A0A1U8M3M5
LinkDB
All DBs
Position
A09:77438366..77449063
Genome browser
AA seq
1057 aa
AA seq
DB search
MVTIMVRKKRTDVPSAGGESSHSHDTGVGSGRATQRPSQQGGAGGGGYSTGRGLVPQSQQ
TGWGGYSAGGRGRGTSQQQFAERPPEYQGRGRGGPPQQGGRGSYGSGRGSGGSGGGPFHG
GPSRPPYPELHQATQPFHGPASFEAGSSSRPPEHAPSAQSLHIPEEAGQAIQPVPSSSKS
VRFPLRPGKGCTGTKCIVKANHFFAELPDKDLHQYDVTITPEVASRGVNRAVMEQLVKLY
RESYLGKHLPAYDGRKSLYTAGPLPFVSKEFRITLIDDDDGSGMQRRECEFRVVIKLAAR
ADLHHLGLFLQGKQADAPQEALQVLDIVLRELPTSRYCPVGRSFYSPYLGRKQSLGEGIE
SWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDVSSRPLSDADRVKIKK
ALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHT
QWPCLQVGNQQRANYLPMEVCKIVEGQRYSKRLNERQITALLRVTCQRPQEREYDIIETV
HQNAYHEDPHAKEFGIKISEKLASVEARILPAPWLKYHDTGSEKNCLPQVGQWNMMNKKM
VNGGTVNNWICINFSRQVQDSVALRFCYELSQMCYISGMAFTPEPVLPPISARPEQVEKV
LKTRYHDAVTKLQTQRKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVFKM
RKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIA
AVVASQDWPEITKYAGLVCAQAHRQELIQDLFKTWQDPVRGTVSGGMIKELLISFRRATG
HKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFAN
NHNDRNAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTA
DALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMISGLAAGRG
GMGGSAGPRSTRAPVAATAVRPLPALKENVKRVMFYC
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggttaccatcatggttaggaagaagagaactgatgttccttctgctggaggtgagagc
tcccactcccatgacacgggtgttggcagtggtcgtgctacccaacgcccttctcagcaa
ggaggagctggagggggaggatactcaactggaagaggtctggttccacagtcccagcaa
actggttggggaggttacagtgctggtggtcggggtcggggtacgtcacaacagcagttt
gctgaaagaccccctgaataccaaggtagaggaaggggtgggcctcctcagcaaggaggt
cgtgggagctatggcagtggtcgaggcagtggtggcagtggaggagggcctttccatggt
ggaccatcccgaccaccttatcccgagctgcaccaagcaacccaaccttttcatgggcct
gcatcatttgaggcaggttcttcatccagaccgcctgagcatgcaccatcggcacagtcg
cttcacatcccggaagaagctggccaagcaattcagccagtcccttcatcaagcaagtct
gtgaggtttcctcttcggcctggaaagggttgcactggcacaaagtgtatagtcaaggct
aaccatttctttgctgaactgccagataaagatttgcaccagtatgatgttactataaca
ccggaggttgcatcacgtggagtgaaccgagctgtaatggagcagctggtaaaattatac
agagaatcatatcttggaaagcaccttcctgcttatgatggtcgaaagagcctttacacc
gctgggcctctcccttttgtgtcaaaggagtttaggatcacccttattgatgatgatgat
gggtcgggaatgcaaagaagagagtgcgaatttagagttgtgatcaaactggctgcacgt
gctgatctgcatcatcttggactctttctgcaagggaagcaagctgatgcacctcaggaa
gctctccaggttcttgacattgttcttcgtgaattacctacttctaggtactgtcctgtt
ggccgttcattttactccccttacctagggagaaagcaatcgttgggtgagggaatagaa
agttggcgtggtttctaccaaagcattcgtcccacacagatggggctctcacttaatatt
gatatgtcttctactgctttcattgagccattgccagttattgattttgttgcacaattg
ctgaatcgggatgtttcttctagaccactatctgatgctgatcgtgtgaagatcaaaaag
gctcttagaggagtcaaggtggaagttacgcaccgaggaaacatgcgaagaaaatatcgc
atatctggtttaacatcacaagcaactagagagctgacttttcctgtagatgaaagaggt
acaatgaaatctgttgtggagtacttttatgaaacttatggtttcgtaatccaacacacc
caatggccttgtctacaagtcggaaaccagcagagagcaaattatttgccaatggaggta
tgcaagattgttgagggtcagaggtactccaagaggttgaatgagagacagatcactgct
ctgctgagggtcacctgccagcgtcctcaggaaagagagtatgatatcattgagacggta
catcagaatgcttaccatgaggaccctcatgccaaggaatttggaattaaaattagtgag
aagcttgcttcagttgaagcacgcattctacctgcaccatggcttaaatatcatgatacc
ggtagtgagaagaactgccttcctcaagttggccaatggaatatgatgaataagaaaatg
gttaatggtgggactgtaaacaactggatctgcataaatttttctcggcaagtccaagat
agtgtggcactaaggttttgttatgaactttcacaaatgtgttatatctctggcatggct
tttactcctgaaccagtgcttcctccaattagtgctcgtccagagcaagtggagaaggtc
ttgaaaacaagatatcatgatgctgtgactaaactccaaacccagcgcaaagagcttgac
ctgctaattgttattcttccagataataatggctctctttatggtgatttgaaaaggatt
tgtgagacagatcttggaattgtttctcagtgctgcttgactaaacatgtatttaaaatg
agaaaacagtatttggctaatgtggcattgaagattaatgtcaaggttggaggaaggaat
acagttcttgttgatgcgatatcacgacgaatacctctagtcagtgaccgaccgactata
atttttggtgccgatgttacccatccgcaccctggggaggattcaagcccttctattgca
gctgttgttgcctcccaagattggcccgagattacaaagtatgctggtttggtttgtgct
caagctcatcgccaggagctcatccaagatttattcaagacatggcaggatccagtaagg
gggactgtttctggtggtatgattaaggaactcctaatatctttccgaagagcaactgga
cataagccacagcgcatcatattctacagggatggtgtcagtgaaggccagttttatcaa
gtattgttgtatgaactagatgctattcgtaaggcatgtgcttctttggagccaaattat
cagcctcctgttacctttgttgtagtacaaaagcgacaccacacaaggttgtttgctaac
aaccataatgatcgcaatgctgttgacaagagtgggaatattttgcctggcacagtggtg
gactccaaaatctgtcatcccacggagtttgacttctacttatgtagccatgctgggatt
cagggtacaagccgtccagctcattatcatgtgctatgggatgagaacaagtttacagct
gatgctttgcagtctcttacaaacaacctttgctatacatatgcaaggtgcacgcgatct
gtgtctatcgttcctcctgcatactatgctcatcttgctgcattccgagctcgtttttac
atggaaccagagacttcagacagtggatcaatgataagtggcctggcagcagggcgagga
ggtatgggtggaagtgctggtccccgaagcacaagagcacctgttgctgctactgctgtg
agacctctgcctgcccttaaggaaaatgtcaagcgggttatgttttattgttag
DBGET
integrated database retrieval system
