Gossypium hirsutum (upland cotton): 107933719
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Entry
107933719 CDS
T04793
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107933719
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
107933719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Prominin
DUF948
DUF5089
Cauli_AT
DUF7201
PigL_N
Occludin_ELL
MCPsignal
DUF6988
Exonuc_VII_L
Med11
ING
FapA
JHD
Hydro_N_hd
PepSY_TM
Zw10_N
V-SNARE
Erythro_esteras
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
107933719
NCBI-ProteinID:
XP_016721487
UniProt:
A0A1U8M3W1
LinkDB
All DBs
Position
D03:54113268..54119094
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AA seq
262 aa
AA seq
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MDSLSAVSEELAEIDGQIADIFRALSNGFQKLDKIKDVNRQSRQLEELTGKMRECKRLIK
EFDREVKAMERRTNANTHRMLSEKKQSMVKELNSYVALKKRYQSNLESNKRVDLFDGPNE
GFSEDNDMLASNMTNQQLMDKGYQMMDETDQAINRAKKVVQETVDVGTETAATLKAQTEQ
MSRIVNDLDSIHFSIQKASKLVKEIGRQVATDKCIMALLFLIVTGIIAIIIVKFVNPNNK
EIRDIPGLAPPAMNRRLLWIPY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggattcattatccgcggttagcgaagagctagcggagatcgacggacaaatcgccgat
atttttcgagcattatcgaatgggttccagaaactggataagattaaggatgttaatcga
cagagcaggcaattggaagagcttaccggcaagatgcgagagtgtaagaggctaatcaaa
gagtttgatagagaagtaaaggcaatggagagaagaactaatgcaaacacccatagaatg
ctgagcgaaaagaagcaatcaatggtcaaggagttgaattcatatgttgcccttaagaaa
cgatatcaaagcaaccttgagagtaataaacgagttgatctctttgatgggcctaatgaa
ggcttcagtgaagataatgacatgctagcttccaatatgacaaaccagcagctaatggat
aaaggataccagatgatggatgagactgatcaagccattaacagggctaagaaggttgtt
caagaaactgttgatgttggaacagagactgctgcaactctcaaggctcagactgaacaa
atgagcaggatagttaatgatctcgattctatccatttttcgatccaaaaagcatctaaa
ttagtcaaagaaattggtagacaggttgctactgataagtgcattatggcattattattt
ctcattgtgaccggtatcatagccatcataattgtcaagtttgtgaatccaaacaacaag
gaaatccgggatattccaggattagcaccgcctgcaatgaaccgtcgattactttggatt
ccttattga
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