Gossypium hirsutum (upland cotton): 107934008
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Entry
107934008 CDS
T04793
Name
(RefSeq) long chain acyl-CoA synthetase 8-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107934008
00071 Fatty acid degradation
107934008
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107934008
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107934008
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107934008
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107934008
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107934008
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
107934008
Exosomal proteins of breast cancer cells
107934008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107934008
NCBI-ProteinID:
XP_016721827
UniProt:
A0A1U8M845
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Position
A07:14877944..14883959
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AA seq
731 aa
AA seq
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MKNTKATTLSQPLTKKFHVDDYLSSFGEKYGTYGIVSAAIAAVIVPILLSSIMGKKKGKK
RGVPLEVGGETGYAVRNARTTELLQFPWEGATTIAELFDQCCKKYSRNHYLGTRRVIKKD
FVTASDGRKFEKLHLGDYEWQTYGEVYQRACHFASGLVNFGHDVDTRIAIFSETRAEWQI
ALQGCLRQNITVVTIYASLGEDALIHSLNETQVTTLICESKQLKKLAAIRPSLETISSII
YFEDNEAANISGVFGSMSSLSVSSFHEVELLGERAPVPPSLPSKDNIAVIMYTSGSTGLP
KGVMITHGNIVALAAAVMTVIPGIGKNDVYLAYLPLAHVLELAAESVMLTAGCAIGYGSP
LTLTDTSSKIMRGTKGDASVLRPTLMAAVPAILDRVRDGVLKKVEEKGGLAKKLFDIAYK
RRLQSIEGSWFGAWGLERWLWDVIVFERVRAALGGRLRLMLSGGAPLSANSQRFINICMG
APVCQGYGLTETCAGSAFTEWDDTTIGRVGPPVPCCYLKLVNWEEGRYSISDKPMPRGEI
VVGGHSVTHGYFNNPEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQH
GEYISLGKVEAALMSSKFVDNLMVHADPFHSYCVALIVPSRDVLEKWAVEAGIKYQDFPE
LCGKAETVSEVQKSLSKVGKDAKLDKFEIPAKITLMAEPWTPESGLVTAALKIKREQIKS
TFKDDLQKLYQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataccaaagcgacaaccctcagccaacccttgacaaaaaaatttcatgtcgat
gattatttgtcatcatttggggaaaaatatggaacatacgggattgtgagtgctgctatt
gctgctgtgatcgtacccatattgctttcctctatcatgggaaagaaaaaagggaaaaaa
agaggagttccactcgaagtgggtggtgaaacaggttatgctgtgcgcaatgctcgaacc
actgagttgcttcagtttccttgggaaggagccactacaatagctgaacttttcgaccaa
tgttgtaagaagtattcacggaatcattatcttggaacaagaagagtaattaagaaggac
tttgttactgctagcgatggaaggaaattcgagaagctacaccttggggattatgaatgg
caaacttatggagaagtttatcaacgtgcttgtcactttgcgtccggtcttgttaatttt
ggtcatgatgttgatactcgtattgcgatattttctgaaactcgagcagaatggcaaatt
gctttacagggttgccttaggcagaatataacagttgtcactatttatgcttcactaggt
gaagatgccttgatccattccctaaatgagacacaggtaacaaccttgatctgtgaatcc
aagcagttaaaaaagttggctgcaatacgcccaagcctggagacgatctcaagtatcatt
tactttgaagacaatgaagctgccaatatttctggtgtatttggaagtatgagtagcttg
agtgtttcgtcctttcatgaagttgagttgcttggggaaagagcacctgttccgcctagt
ctaccctccaaggacaatatagcagttattatgtatacaagtggcagtacaggtctgcca
aagggagttatgataactcatggaaacattgtagcccttgctgcagcggttatgactgtg
atcccaggaatcggaaagaatgatgtatacttggcatatttgcccttagctcatgttctg
gaattggcagctgagtcagtgatgctgactgcaggttgtgcaattggctatggttcacct
ttgacactaactgatacttctagtaaaatcatgagagggactaagggagatgcttctgta
ttgaggcctactctgatggcagccgttccagctatattagatcgtgttcgggatggagtt
ctgaaaaaggttgaggagaagggaggattagcaaagaaactttttgatattgcttataaa
cgtcgactgcaatctatagaaggaagctggtttggtgcttggggacttgagagatggttg
tgggatgttattgtttttgaaagggtacgtgctgcactaggaggccgcttacgacttatg
ctctctggtggggctcctttatctgctaattcccaacgcttcatcaacatttgcatgggg
gctcccgtatgtcaaggatatggcttgacagaaacatgtgctggaagtgctttcactgag
tgggatgacacaactataggccgagttgggccacccgttccttgttgctaccttaagctt
gtcaattgggaggaaggtcgatattcaatatccgacaaaccaatgcctcgaggagagatt
gttgttgggggacatagtgtaactcatggctatttcaacaatcccgagaaaactgatgag
gtttacaaggtcgatgagaggggcatgcgctggttttacaccggggatattggacaattt
catcctgatggatgtcttgagattatcgataggaaaaaggacattgtcaaacttcaacat
ggagagtatatatctctcggaaaggttgaggcggcattgatgtcgagcaagtttgtcgac
aatttgatggtgcatgctgatcccttccacagctattgtgtggctttgattgttccgtca
cgcgacgttcttgagaagtgggcagtagaagctggcataaagtaccaagatttcccagaa
ctgtgtggcaaagctgaaactgttagtgaagtccaaaaatcactttcaaaggtggggaaa
gatgcaaaactagacaaatttgaaatacctgcaaagattacactgatggcagaaccatgg
acacctgaatcaggattggtcacagcagcactcaaaataaagagggaacagataaagtca
acgttcaaagatgatctccaaaagttgtaccagtaa
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