Gossypium hirsutum (upland cotton): 107934010
Help
Entry
107934010 CDS
T04793
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107934010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107934010
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107934010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
107934010
NCBI-ProteinID:
XP_016721830
UniProt:
A0A1U8M4Y0
LinkDB
All DBs
Position
A07:complement(14843547..14847425)
Genome browser
AA seq
477 aa
AA seq
DB search
MFENGKLFIGGISWDTNEGHLKEYFNTFGEVIEAVIMKDRTTGRARGFGFVVFADPIVAE
RVVKEKHSIDGRIVEAKKAVPRDDQNVMSRSTSSIHGSPGPGNARKIFVGGLASTVTESD
FKKYFDQFGNITDVVVMYDQNTQRPRGFGFITYDSEEAVDKVLLKNFHELNGKMVEVKRA
VPKELSPSPSHSPISGYNYDLNRVNNFLNGYTQGYSPSNVGGYGLRVDARFSPVTNGRNR
VPPFGSGYAMGMNIEPKLNPSFGNSASLSSNMSYRRGLSPYYVGNTNRFCSPIGNDGSSG
GNTSFFSSVTRTLWGNGGLDYNTNASSSSLYVGSGSGTIGENASGNGGINWGSSAISSQG
EGNNVSRNSVEFGYGSGDNSFGLGTTGYGRNSGTNLTPTSAYAASSGGYDGAFADLYGSA
SVYRDATRGSSMSEQDGSGSFGYGLDSATSGVLRKSSPGYIGGYSVNRRQANSGIAT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatgggaagctatttattggtgggatatcttgggacaccaatgaagggcat
ctcaaggagtatttcaatacttttggtgaagtgatagaggcagtgatcatgaaggatcgg
accactgggcgtgctcgtggttttggtttcgttgtttttgctgaccccatagttgctgag
agagtagtcaaggagaaacacagcattgatggcaggatagttgaagcaaaaaaggcggtt
cctagggatgaccagaacgttatgagtagaagcactagtagcatccatggttcacctggt
ccaggcaacgcaagaaagattttcgtaggaggtttagcatctacagttacggagagtgat
ttcaagaagtattttgatcaattcgggaatatcacagatgttgtagtgatgtatgatcaa
aacacacaaaggcctaggggtttcgggttcatcacttatgattcagaagaggcggtggac
aaggtgttgctaaaaaatttccatgaactgaatggtaaaatggtcgaggttaagcgagca
gttcccaaagagttatcgcctagtcctagtcatagtcccatttctggatataactatgat
ctgaatagggtcaacaactttcttaatggttacactcagggatatagtccaagcaatgtc
ggaggctatggacttagggtagatgcgagattcagtccagttactaatggccgaaacagg
gttcctccttttggttctggttatgcaatgggcatgaacattgagcctaagttaaacccg
agttttggcaatagtgcaagtcttagtagtaatatgagctatagacgaggattgagcccg
tactatgttggtaatacaaatagattttgtagtcctatcgggaatgatggaagtagtgga
ggtaatacttcctttttcagctcagtgaccaggaccctttggggaaatgggggacttgat
tataacacaaatgcttctagttccagtctgtatgttggatctggaagtggtactattgga
gaaaatgcttctggaaacggtggaattaattggggttcttccgcaatttccagtcaaggt
gaggggaataatgtttctagaaatagtgtggaatttggctatggaagcggcgataacagc
tttgggttggggacaacagggtatggaagaaacagtgggaccaatttgacaccaacatca
gcatatgctgcatcaagtggtggttatgatggagcctttgcggatctttacggcagtgct
tcggtttacagggatgccactaggggatcatcaatgtccgagcaagatggttctggttcc
tttgggtatggacttgatagtgccacttctggtgttctgcgtaaaagttctcctggttat
atcggtggttatagtgttaatagaagacaagcaaatagtggaattgctacctag
DBGET
integrated database retrieval system
