Gossypium hirsutum (upland cotton): 107934013
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Entry
107934013 CDS
T04793
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107934013
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107934013
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107934013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
zf-C2HC5
Prok-RING_4
RINGv
DUF1125
zf_RING_Vps8_fungal
DUF5431
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
107934013
NCBI-ProteinID:
XP_016721832
UniProt:
A0A1U8M4U3
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All DBs
Position
A07:complement(14948714..14950466)
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AA seq
150 aa
AA seq
DB search
MGLSSLPAPSEGVLCILLVNTALSISIVKGIIRSILHVVGIHLPQPPSDYTENPSEANDF
HLNTPESYIEEFRSRTPTIHFGAVLCSCKRPQHDCRVCLTQFEPKSEINHLSCGHLFHKV
CLEKWLDYWNITCPLCRTPLLTEEEASCFW
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcaagtcttccagctccatcagaaggagtgttatgtatactcttggtaaac
acagctttatctatatctatagttaaaggcataatccgatcgatccttcacgttgtcggt
atccatctcccacaaccaccatcggattacactgaaaatccctcggaagcgaatgatttc
caccttaatactcctgaaagttacatcgaggaattccggagtaggaccccaacaattcat
ttcggtgctgttttatgtagctgcaaacggcctcagcacgactgtcgggtttgtctgact
cagtttgagccaaaatccgagattaaccacttgtcgtgtggtcatctctttcacaaggtg
tgtttggaaaaatggttggattattggaatattacatgccctctttgcaggactcctttg
ttgactgaagaagaagcttcttgcttttggtaa
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