Gossypium hirsutum (upland cotton): 107934100
Help
Entry
107934100 CDS
T04793
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107934100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107934100
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107934100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107934100
NCBI-ProteinID:
XP_016721940
UniProt:
A0A1U8M598
LinkDB
All DBs
Position
A01:complement(805985..811099)
Genome browser
AA seq
300 aa
AA seq
DB search
MGLPNASGDLSTEVEVDAFRRLFPLRFYKKHLLESIRPDARPLGRARETTIALGAVASAN
GSALAKIGSTTMLAAIKMEVMTPSLETPDEGCIAIDFHMPPICSPIVRPGRPAEGAPVVA
KQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLEIP
VVSLNDDGKIVLSEEQGLSDREPVNKEKRKINLSSVPFSLTCVLHKNYILADPTAEEESI
MDTIVTVVLDSSSQLVSLHKPGGTVLAYTSAIQDCIALTRQRVKELQKILEEGISGMEVD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgggattaccaaatgcgagcggtgacttgtcaactgaagttgaggtagatgctttcaga
cgcctctttccccttcgtttctacaagaaacatcttttagagtctatacgtcctgatgct
cgtccgcttggaagagcaagagaaactaccattgcccttggggctgttgcatctgctaat
ggttcagcacttgcaaaaattggttcaactactatgttggctgctatcaaaatggaggtc
atgaccccttcattggaaacaccggatgagggttgtatagcgattgatttccacatgcct
ccaatttgttctccaattgttaggcctggcagaccggctgagggagcaccagtcgtggca
aagcaattgtcagacactattttaagctctggcatgatcaatttgaaggaactgtccttg
gttagtggaaaagctgcttggatggcatatttggacatatactgtttggatgctgatggt
gctctttttgacactgcattactctcagctgttgctgccttttctcatttggaaatccca
gtggtatctctcaacgatgatggaaagatcgttttatcagaggaacaaggactatctgac
agggaaccagtcaataaggagaaaagaaaaattaatctgagcagtgttccgttttcattg
acatgtgtacttcacaagaactacattttggcagatcctactgccgaggaagaatctatt
atggacacaattgtaaccgtggttttagattcatctagtcaactcgtctcgcttcataaa
ccaggtggaacagttctagcatatacatcagctatccaggactgcattgcattaacacgg
caaagagtgaaggaacttcaaaagattctagaggaaggcatttctggtatggaggttgac
taa
DBGET
integrated database retrieval system
