Gossypium hirsutum (upland cotton): 107934168
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Entry
107934168 CDS
T04793
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107934168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107934168
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107934168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
107934168
NCBI-ProteinID:
XP_016722024
UniProt:
A0A1U8M906
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All DBs
Position
A10:complement(111893456..111899179)
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AA seq
262 aa
AA seq
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MENKDNYLETSKAERSVWLMKCPGLVSRSLKAPQLSSSSSTSSASPSQAVAKVILSIDPR
VSSDDNDSSSPQFTMELVGTETGDVPKRYSMDMTKDFVPMSVFSETSQGKLAVEGKILNK
FDMRPHDENIENYGKLCRERTNQSMNKSRQIQVIDNDNGTHMRPMPGMIIAAVFNEKKKA
PAKTSDTKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDILKDLCIYNNK
GTNQGSYELKPEYKKATDGTNP
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaggataactatcttgaaacaagcaaagctgaaaggtcggtgtggttaatg
aaatgccctggattagtttcacgctctctcaaagcccctcaactctcttcttcttcttct
acctcttctgcttctccttctcaagcggttgccaaagttattctttccattgacccccgt
gtttccagtgatgataatgactcctcttctcctcagttcaccatggaattggttggcaca
gaaaccggggatgtaccgaagcgctattccatggatatgaccaaagactttgttccaatg
tctgtgttttctgagacttcccaaggaaagcttgcggttgagggaaaaatactgaacaag
tttgacatgagacctcatgatgaaaacatcgaaaactatgggaaactttgccgtgaaagg
acaaatcagtctatgaacaaatccagacagatacaggtcatcgacaatgataatggaact
cacatgaggcctatgccagggatgattattgctgctgtattcaatgaaaagaagaaggcg
cctgccaagacatctgatacaaaaagaacaaggagggatcgtggggagatggaagatatt
atgtttaagctctttgaaaggcaatcgaattggactttaagacaactgattcaagagaca
gaccaacctgaacaatttctgaaagatatacttaaagacctgtgtatatacaacaacaag
ggaactaatcaaggatcgtatgagctgaaacctgaatacaagaaagcaaccgatggtact
aatccttaa
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