Gossypium hirsutum (upland cotton): 107934199
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Entry
107934199 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107934199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107934199
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107934199
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107934199
NCBI-ProteinID:
XP_016722059
UniProt:
A0A1U8M936
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Position
A10:complement(112250132..112253921)
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AA seq
304 aa
AA seq
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MPRYDDRRGSGTRLYVGHLSSRTRSRDLEDMFSRYGRIRDVDMKRDYAFVEFSDPRDADD
ARYSLNGRDLDGSRIIVEFAKGVPRGPGGSRDYLGRGPTPGSGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPKKLSRRPRSYSRSPSPRRARSRSRSYSRSRSRSPVK
RERSFEREDKRSRSPKRHRGSPSPSRGRKRSPVPDERNLQEKGSPSPREGKGRLNNGSDY
SASPRGRNRSPDREADAEDRDYKNPAKEKENGQSRSPSPLPREDRSPIYDDDDNHASPRR
SESN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggtatgatgaccgccgcggtagtggtactcgcctttatgttggtcacttatcg
tcaaggacaagatcacgtgatctcgaggacatgtttagcagatacgggagaatacgagat
gtggatatgaagcgcgactatgcatttgttgaattcagcgaccctagagatgctgatgat
gcaagatattcattgaatggtcgagacttagatggaagccgtatcattgttgaatttgcc
aagggagtgccccgtggccctggtgggtctcgtgattaccttggaagaggccctactcct
gggtcaggacgctgcttcaattgcggaattgatggtcactgggcccgtgattgcaaagct
ggggattggaagaacaagtgttatcgttgtggagaacgaggccacatagaaagaaattgt
caaaacagtcctaagaaactaagccgtagaccccgcagttactcacgctcacctagtccc
cgccgtgccagaagcagaagccgcagttacagccgcagtagatcaagatcacctgtgaag
agagaaaggagttttgagcgagaagataaaagatcaaggagccctaagcgccacagggga
tcgccatcaccatctagggggaggaagcgtagtccagtgcccgatgaaagaaaccttcaa
gagaaaggtagcccttccccaagggaaggcaaaggcaggcttaacaacggttcagattac
agtgcaagtccaaggggaagaaacagaagcccagatcgtgaagctgatgctgaagacagg
gattataagaaccctgcaaaagagaaagagaatggccagagccgcagccctagcccactc
cctagggaagaccggagccctatttatgatgatgatgataatcacgcctctcctaggcgc
agtgaatcgaattaa
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