Gossypium hirsutum (upland cotton): 107934335
Help
Entry
107934335 CDS
T04793
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107934335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107934335
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107934335
Prokaryotic type
Archaeal type
TFB
107934335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
HTH_11
Cyclin_N
HTH_36
Phage_terminase
Motif
Other DBs
NCBI-GeneID:
107934335
NCBI-ProteinID:
XP_040947783
LinkDB
All DBs
Position
D04:7254459..7255631
Genome browser
AA seq
288 aa
AA seq
DB search
MASSFCSTCEIDTETIIDHRAGYNLCSRCGSVLEISPFDEIPDLPIFSDSDENYDEFEYP
LFEIDMSTWGPSLNSKDQKNVKTPLKKSLKLLAVMGDRLRLTKELKERAAEIYNIVDDYR
TCRGRSLNSIVAACFFIACKESGSSRTLSEIAKAADGVSRKSINRTAESIKKQLEVETWK
VQPGDLIERLCSNLGLGNQAIKAVKEAVERTEYLDIRRSPKTVLAAIIYMVIQLSHDKET
APVKDIAKVMEVTEITIRKSFKDISIFGSKLIPDWYAKEEDIKKIPVP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagcttctgttcaacctgtgaaatagacactgaaactattattgatcatagg
gctggctataatttatgttctcgatgcggctcggttcttgaaatcagcccgtttgatgaa
attcccgacttgccaatcttctcagattctgatgaaaattacgatgaatttgaataccca
cttttcgaaatcgatatgtcgacttggggtccgagcttaaactccaaagatcaaaagaac
gtcaagactccattgaagaaaagcttgaaactgcttgcagttatgggggacaggttaagg
ttgacgaaagagctcaaagaaagagctgctgagatatacaacatagtcgatgattataga
acgtgtagaggacgaagcctaaattccattgtcgcggcttgctttttcattgcttgtaaa
gaaagcggatcttctcggacgttgagcgaaatcgctaaggcggcggacggagtgtcgagg
aagagcattaatcgaaccgccgaatcgataaagaaacagctggaagtggagacctggaag
gtgcagcccggcgacctcatcgaacgattgtgttcgaatctcggactgggaaatcaagcc
attaaagcagtcaaagaagctgttgaaagaacagaatatcttgacataaggaggagtcca
aaaacagttttggctgccattatttacatggtaatccagcttagccatgacaaagaaaca
gctccggttaaagatattgcaaaggtaatggaggttactgagattacaatcaggaaatca
ttcaaggatatttcaatttttggatcaaagctgatacctgattggtatgctaaggaagag
gacatcaagaaaattcccgtcccttga
DBGET
integrated database retrieval system
