Gossypium hirsutum (upland cotton): 107934397
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Entry
107934397 CDS
T04793
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107934397
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107934397
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
107934397
Ion channels [BR:
ghi04040
]
Other channels
Mechanosensitive channel (Piezo)
107934397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
107934397
NCBI-ProteinID:
XP_016722308
UniProt:
A0A1U8M9M5
LinkDB
All DBs
Position
D08:complement(61510409..61525350)
Genome browser
AA seq
2487 aa
AA seq
DB search
MGSFLIGFALPLLLLTASLLNWSLISLVDLIAFLLIQYTAPKIGFRFRRKYLLLWPVIIF
SLLVFLSQVAYLVIWAVGGYKQSVGDAWWLKLIGFMIIQSWRSPTVIYFLVTQLLVLVVA
LLDIHGNRFGLVPWRYTCWGHFLTFVEQLGSHLKVASCLLLPAIQLVVGISHPSWISLPF
FIGSCIGLVDWSLTSNFLGLFRLWKALQFYAGFSIFMLYVYQLPIEFSSMLQWIADFVGL
FKICSTSEWTEIFSSVSLVLFYIMLSYVKCDLEEMDFIMSTRESSLTEQLLPSKHSFFIR
ESRSGVRHTNVLLRGTAFRTFTINFFTYGFPVSLFALSFWSFHFASICAFGLLAYVGYIV
YAFPSLFRLHRLNGLLLVFILLWAVSTYIFNVAFAFLNRNFGKDMEIWEMVGFWHYPIPG
FFLLAQFCLGILVALGNLVNNSVFLYLSDEDALSSNNSAVEVDGETKVFIVATIAWGLRK
CSRAIMLALIFIIAMKPGLIHAVYLVFFLIYLLSHNISRKIRQSLILLCEAHFALLYLLQ
IDLISNALEQKGSIVLEIMSQLGLHKHNSSLNFLEIALLACFCAVHNHGFEMLFSFSAIV
QHTPSPPVGFSILRAGLNKSVLLSVYASPSASYYHDNPSYERRIASFLSEIGQKFLSIYR
SCGTYIALLTILLTVYMVTPNYISFGYIFLLLVWIIGRQLVERTKRRLWFPLKIYAIMVF
IIIYSLSSFTSFKIWLSGFINLYFYLGYDPEASLLDNIWQSLAVLIVMQLYSYERRQSKY
NQTYHPNPLGSGILGFAKRFLIWHSQKVLFVSLFYASLSPICAFGFLYLLGLVICSTLPK
ASQIPSKSFLVYTGFLVTSEYLFQMWGKQAEMFPGQKHSDLSLFLGICTYEPGFWGIESG
LRGKVLVISACILQYNVFRWMDNMPSGISNKGKWEEPCPLFLPAEDNYTNGYMSNGEDKP
SSSVGTEPIRQDRAAINSWSSLSSAFSQAPHHGSSKAAGGFEVNGVRKFSFGYFWGSTKE
SHKWNKKRILALRKERFETQKALLKIYLKFWIENMFSLYGLEINMIALLLASFALLNAIS
MLYIAVLAVCILLNRQIIRKLWPVLVFLFASVLILEYFAIWKSMFPLNQNKPSQSEIRCH
DCWKSSASYFQYCRSCWLGLIIDDPRMLISYFLVFLLACFKLRADHLSDFSGSSTYRQML
SQRKNSFVWRDLSFETKSMWTFLDYVRLYCYCHLLDLVLVLILITGTLEYDILHLGYLAF
ALVFFRMRLEILKKKNKIFKFLRIYNFVVIVLSLAYQSPFVGEFSSGKCNTVSYIYEVIG
FYKYDYGFRITARSALVEIVIFMLVSLQSYMFSSHESDYVSRYLEAEQIGAIVHEQEKKA
AWKTAQLQQIREAEEKKHQRNLQVEKMKSEMLNLQIKLHSMNSVATFGDVSPDDEGLRRR
RTSLTSNRDVGPLDKEESSLWKQEQVNKQDSVFPPETHTYAAYMKAENPEVVESPKNSME
YAPCEITEIESDADSAFLDSERSRKNQAKEHPLISAVHLLGDGVSQVQSIGNQAVNNLVN
FLNIAPEDSDMNEHSSVEDEAFDEMEGQKMQNIHLNRSSSLQSDKSSDATSLQLGRIFWH
IWSQMWSNIDVVCYCLFVLVFLWNFSLLSMVYLAALFLYALCVNTGPTYIFWVVMLIYTE
VYMLLQYLYQIVIQHCGLSIMSDLLREIGFPAREIKSSFVVSSLPLFLVYLFTLLQSSIS
AKDGEWMPSTDYNSHRRSSLYRKEVLVNYSWSERVSELFQFVINTAKLVIRSFFWYWKSL
IQGAETPPYFIQVSVDVHLWPEDGIQPERVESGMNQLLRLVHDERCTQTIPSNCPFASRV
QVQSFERSRESPNVALIVFEVVYASPLTGCTSADWYKSLTPAADVAKEILGAQRAGFVEA
TGFPYQILSVIGGGKREFDLYAYIFVADLTVFFLVAMFYQSVIKNKSEFLDVYQLEDQFP
VEYVTILIIIFFLIVVDRILYLCSFATAKVVFYLFNFVLFTYSITQYAWRMEPSDQHAAR
LVLRAIFLAKAVSLALQAVQIRHGIPHKSTLFRQFLTSEVSRINYLGYRLYRALPFLYEL
RCVLDWSCTTTSLTMYDWLKLEDINASLYLVKCDALLNRAQHKQGEKQTKMTKCCNGICL
FFILICVIWAPMLMYSSGNPTNIANPIKDATFQIDISTIGGRLTLYHTTLCEKIPWDTLN
SDANLDPLNYLDTYNKNDIQLICCQADASTLWLVPDVVQRRFIQSLDWDMDMGITSTWLL
SRDRPKGKEVAKYEKPLDPKDLPDRSDVQKVFNGSANGFRVYNLYSRYFRVTGSGEVRTF
EPEVNSVSLVSADLVINRATFEWWSFHIINSSDMVHCGGFTGPMAVVVSEETPPQGILGD
TLSKFSIWGLYITFVLAVGRFIRLQCSDLRMRIQYENLPSCDRLIAICEDIYAARAEGEL
GVEEVLYWTLVKIYRSPHMLLEYTKPD
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttcctaattgggtttgctttgcctttgctgcttctcacagcttcattgctc
aattggagtttgatctctcttgttgatttgatcgctttccttctcattcagtatactgca
cctaaaataggatttcgtttcaggaggaaatatttgttactgtggcctgttatcatcttt
tccctacttgtttttctttcacaagttgcatatcttgttatatgggctgttggaggctat
aaacagagtgtaggagatgcttggtggctcaagctaattggttttatgataatccagtct
tggagatctcccactgtgatctattttttggttacccaacttctagtgctagtagttgca
ttgcttgatatacatgggaacagattcggtcttgttccgtggcggtatacttgttggggt
catttcttaacatttgttgaacaattaggttcccatcttaaagttgcttcctgtttgctt
ctacctgctattcagctggttgtgggaattagccatccctcgtggatttctctgccattt
ttcattggaagctgtattgggctagtggattggtctttgactagcaattttctaggacta
ttcaggttgtggaaggctctccagttttatgcaggcttcagcattttcatgctttatgtg
tatcaactccctatagagttctcaagtatgttacagtggatagctgattttgttggtcta
ttcaaaatatgttcaacatctgagtggactgaaattttctcttctgtttctcttgtactt
ttttacatcatgctatcctacgtcaaatgtgatttggaggaaatggattttatcatgtcc
acgcgggaaagtagcttgacagagcaactacttccttcaaagcattcattcttcattcgt
gaatcaagatctggtgtaaggcataccaatgttttactacgagggacagctttccggact
tttaccatcaactttttcacttacggttttccagtatccttgtttgctctttccttttgg
agtttccattttgcaagtatatgtgcttttgggctacttgcatatgttggctacattgtg
tatgcatttccttccctgttccgtttgcaccggttaaatgggcttctccttgtcttcatt
cttttgtgggctgtaagcacttatatattcaatgtggcatttgctttcttgaataggaat
tttgggaaggatatggaaatttgggagatggttggattttggcattatcccatacctgga
ttttttttgcttgcacaattttgtcttggaattttggttgctttggggaatcttgtaaat
aattctgttttcctctatttatctgatgaggacgctctatcatcgaacaactctgctgtg
gaagtggatggagagaccaaggtgttcattgtggctacaattgcatggggactgcgcaaa
tgttctcgagctatcatgcttgcactgatatttatcatagcaatgaaacccggattaatc
catgctgtctatttggttttctttttgatctatcttttgagccataacatcagcagaaag
attcgtcagtctctgattcttctttgtgaagctcactttgcattattgtaccttcttcag
atcgatttgatctctaatgctttggagcaaaaaggctccattgttttggaaatcatgtcg
cagttgggtctccataaacataacagttcattgaactttctggaaatagctttgcttgct
tgcttctgtgcagtccataaccatgggtttgagatgctattttcattctcagcaattgtg
cagcacacccctagccctcctgttggatttagcatcttgagagctggtctgaacaagtct
gtcctcttgtcagtctatgcatctccaagcgcctcctactaccatgataatccttcttat
gagagaaggatagcatcattccttagcgaaattgggcagaagtttttatcaatatatcga
tcatgtggaacctacattgctttgctgactattcttctcacagtatacatggtgacaccc
aactatatatcatttggatacatcttccttctccttgtttggattattggaagacaactt
gttgagagaactaaaaggcgcctatggtttccattaaaaatatatgcaattatggtgttc
attattatctatagcttaagcagttttaccagctttaagatttggctctctgggtttata
aatctctatttttatttgggttatgatcctgaagcttcattgttggataatatttggcaa
tctctagctgttctaattgtgatgcaactttatagctatgaaaggaggcagagcaagtac
aaccaaacttaccatcccaatcctttaggttctgggatccttggctttgccaagcggttt
ctgatttggcacagccagaaggtcctgtttgtctcattattctatgcatctttatctcca
atttgtgcttttggattcttgtatctacttggccttgtcatatgttcaactttacctaaa
gcttctcaaatcccatccaaatcattcttagtttatacaggatttctggttacatcagag
tatctttttcagatgtggggtaaacaagctgaaatgtttccagggcaaaagcattctgat
ttgtcgctctttttgggtatttgtacatatgagccaggattttggggtatagaatcgggc
ttgagaggaaaggttctggtaatttctgcatgcatccttcagtacaatgttttccgttgg
atggataatatgccaagtggtatttcaaacaaaggcaaatgggaagagccctgtccttta
tttttaccagcagaggataactacaccaatggctacatgtctaatggggaagataagcca
tcttctagtgttgggacagaacctataagacaagacagagcagcaatcaattcatggtca
tctttgagcagtgctttttctcaagcacctcatcatgggtcctccaaagcagcaggaggt
tttgaggttaatggtgtgagaaaattttcatttggatatttctggggaagcaccaaggag
agtcataagtggaacaagaagcgaatccttgcattaaggaaagagagatttgaaacacag
aaggctctcttaaaaatatatttgaaattctggatagagaacatgtttagcctttatggc
ctggagattaacatgattgctttgcttctcgcaagttttgctttgttgaatgccatctct
atgctatatattgcagtgcttgctgtttgtattcttttgaatcggcagattattcgtaaa
ttatggccagttcttgtcttcttgtttgcttctgttctcatcctcgagtatttcgccatc
tggaagagtatgttccctctgaatcaaaataagccaagtcagtctgaaatccgttgccat
gactgctggaaaagctcggcttcatattttcagtattgcaggagctgttggctgggactg
atcattgatgatccccgaatgcttattagctatttcttggtctttctgctggcatgtttt
aagcttcgtgcagatcacttgtctgatttctcaggttcatcaacatatcggcaaatgttg
tctcaacgtaaaaattcatttgtttggcgagatctctcttttgaaaccaaaagcatgtgg
acctttctcgactatgtaaggctttattgttattgccatctattggacctggtccttgta
ttgattttgattactggaactcttgagtatgatattcttcacctgggttatcttgctttt
gctcttgtttttttccggatgaggcttgaaattctcaagaaaaagaataaaatattcaag
ttcttgcgtatctacaactttgtggtgatcgttctttctcttgcttatcaatcacctttc
gtgggggagtttagttctggaaagtgcaatactgtgagctacatatatgaagtcattgga
ttttacaagtatgactatgggtttcgaattactgccagatccgcacttgttgagattgtc
atatttatgttggtatcacttcagtcatatatgttttcctcccacgagtctgattatgtg
tcacgataccttgaagcggagcaaattggtgccattgtacatgagcaagagaaaaaagct
gcttggaaaactgcacagttgcaacagattcgtgaagctgaggagaagaaacatcaacgc
aacttgcaagtggagaagatgaaatctgagatgcttaacttgcaaataaagctccatagc
atgaattctgttgcaacttttggtgatgtctctcctgacgatgaaggcctacggaggagg
aggacttctcttacttcaaatagggatgttgggcctcttgacaaagaggaaagctctctt
tggaagcaagaacaagttaataaacaagattcagtgtttccccctgaaacacacacatat
gctgcttatatgaaagcagaaaatcctgaagttgtggaatctccaaagaattcaatggaa
tatgcaccttgtgagatcactgaaattgaatctgatgctgatagtgcttttttagattca
gagagaagtaggaaaaaccaagcaaaggagcatcctttgatttctgcagtacacctcctc
ggtgatggcgtttcccaggtacagtctattggaaatcaggcagttaataaccttgtaaat
ttcttaaacattgcaccagaagattccgatatgaatgagcattcatctgttgaggatgag
gcctttgatgagatggagggccaaaagatgcagaatatccatttgaaccgttcatcttct
ctgcaatctgataaaagttctgatgctacgagtttgcagctggggcggatcttttggcat
atatggtcccagatgtggtctaatatcgatgttgtgtgctactgtttgtttgtcctcgtc
tttctttggaacttcagtttgctatctatggtgtatcttgcagctcttttcttgtatgct
ctatgtgtgaatacaggtccgacttatatcttctgggttgtcatgctgatttacacggaa
gtttatatgttgcttcagtatctgtatcaaattgtaatccagcattgtggattgagtatc
atgtcagacctgctccgtgaaataggatttcctgctcgtgaaatcaaatcgtcatttgtt
gtgagttcgttgcctctatttcttgtgtacttatttaccctcttacaaagctctataagt
gcaaaagatggtgaatggatgccctctactgactataactcccataggaggagttctctt
tatagaaaagaggttcttgtgaactatagctggagtgaaagggtatcagagttgttccaa
tttgtaataaatacggcgaaactggtaattagaagcttcttctggtactggaaatcattg
atacagggagcggaaactcctccttactttattcaagtttcggtggatgttcatttgtgg
ccagaggatgggattcagccagaaagggttgagtctggaatgaatcaactgctcaggcta
gttcatgatgagagatgtactcaaacaatccctagtaattgtccatttgctagtagggtc
caggttcaaagctttgaaagaagtcgagaaagcccaaatgtggctctgattgtttttgag
gtggtgtatgcatctcccttgacaggatgtacctcagcagattggtacaagtcactaact
ccagcagctgatgtggcgaaagaaattcttggggcacagcgtgctgggtttgttgaagca
acgggattcccataccaaatactctctgtaattggtggtggaaaaagggaatttgatctg
tatgcttacatatttgttgctgatctgactgtgtttttcctagttgcaatgttctaccag
tctgtcataaagaacaagagtgaatttcttgatgtttatcagctagaagatcaatttcct
gtagaatatgtaacaatcttaattatcatttttttcttgattgttgttgatcgaatactt
tatctctgttcattcgcaacggcaaaagttgttttctaccttttcaattttgttctcttc
acatattcgattacacagtatgcttggcgaatggaaccttccgaccagcatgctgcacgg
ctagtactgcgtgctatatttcttgctaaagcagtttctctagcacttcaggctgtacaa
atccgacatggaattcctcataaaagcaccttgtttcgacagtttttgaccagtgaggtc
tcacgaattaattacttaggctatagactttatcgggctctgccatttctttatgaatta
cgatgtgtacttgattggtcatgcacaacaacatctttgaccatgtatgactggctcaaa
ctggaagacataaatgcaagcctgtacctcgtcaaatgcgatgctttgttgaatagagct
cagcacaaacaaggagaaaagcaaacaaaaatgaccaagtgctgcaatgggatatgtctg
ttctttatcctaatttgtgtcatctgggctcctatgctgatgtacagcagtggcaatccg
acaaatattgcaaaccccatcaaagatgcaacttttcaaatagacatcagtaccattggt
ggaaggttgaccttgtatcatactaccctctgtgaaaagatcccatgggatacgctcaat
tccgatgctaatctagatcccctaaattatttggacacttacaataagaatgatatacaa
ttgatatgctgccaagcagatgcgagtactttgtggctcgttcccgatgtggttcagaga
agatttattcagtcccttgattgggatatggacatgggtatcacatctacttggctgctt
tcaagggatcggccaaaaggcaaggaagttgcgaaatatgaaaaacctctagatcctaag
gatcttcccgatcgatctgatgttcaaaaggttttcaatggttctgcaaatggctttagg
gtatacaatctttattcaagatacttccgtgttaccggttctggtgaagtcagaactttt
gagccagaggtcaattcagttagtttagtgagtgcagatcttgttatcaatcgagcaact
ttcgagtggtggtccttccatattatcaattcatctgatatggttcactgtggaggtttc
acaggaccaatggccgttgtagtatccgaagaaactccaccacagggtattcttggagac
acactaagcaaattcagcatttggggtctctacataacttttgtactagctgttggccgg
tttatcaggcttcaatgctccgacctaagaatgagaatacagtatgaaaacctgccttcc
tgtgacaggttgatagccatttgtgaggatatatatgctgcgagagcagagggtgagctt
ggagtcgaagaggtcctttactggaccctagtgaagatttacagatcaccgcacatgcta
cttgagtacactaaacctgactag
DBGET
integrated database retrieval system
