Gossypium hirsutum (upland cotton): 107934399
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Entry
107934399 CDS
T04793
Name
(RefSeq) DNA topoisomerase 2 isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107934399
03036 Chromosome and associated proteins [BR:
ghi03036
]
107934399
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
107934399
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Topoisomerases
107934399
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
107934399
Centrosome formation proteins
Centriole proteins
107934399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107934399
NCBI-ProteinID:
XP_016722312
UniProt:
A0A1U8M665
LinkDB
All DBs
Position
A10:complement(114494053..114500750)
Genome browser
AA seq
1458 aa
AA seq
DB search
MVADSKLPLQSSNNVNTKASKTIEETYQKKTQLEHILLRPDTYIGSIEQHTQRLWVYEND
EMVHRDIKYVPGLYKIFDEILVNAADNKQRDPSMDSIKVVIDAEQNLISVYNNGDGVPVE
IHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQK
KYKQVFKNNMGNKTEPVITKCKEGENWTRVTFKPDLAKFNMTHLEDDVVALMRKRVFDLA
GCLGKTVKVELNGKRIAVKSFLDYVNLYLSAASKNKSEPLPRISEKVNARWEVCVSLSEG
QFQQVSFVNSIATIKGGTHVDYVTNQISNYVMNAVNKKNKNANVKAHNVKNHLWVFVNAL
IDNPAFDSQTKETLTLRQSSFGSKCELPEDFLKKVAKSGVVDNLLQWAEFKHSKDLKKTD
GTKSGSIRGIPKLDDANEAGGRNSDKCTLILTEGDSAKSLAVAGLSVVGRNHYGVYPLRG
KLLNVREASHKQLMENAEIQNLKRILGLQQNKEYTDVKSLRYGHLMIMTDQDHDGSHIKG
LLINFIHSFWPSLLKVKSFMVEFITPIVKATRKVNKQEEELCFYTMPEYQAWKESLGNNA
KSWKIKYYKGLGTSTGPEGKKYFKDIDKHMKEFVWEGDRDGDAIELAFSKKKIEARKNWL
RQFEPGTHLDHNDKLINYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCAFKRN
FVHEAKVSQFSGYVSEHSAYHHGEQSLCSTIVGMAQDFVGSNNINLLRPGGQFGTRNQGG
KDAASARYIFTNLTTITRYLFRKDDDGLLDYLNEDGQSIEPSWYVPVIPMVLVNGSEGIG
TGWSSYIPNYNPRDIVANVRRLLNGEPMEPMHPWYRGFKGTIEKTASKESGVTYTISGIV
EEVDETTLKITELPIRRWTQDYKEFLESIITANDSFIKEFKQYSDDRTVHFEVFMTEENM
MLAKQEGLMKKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHLRLEFYEKRRKHM
LDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKTKAVEVAVA
GDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVEELRKHTPK
SLWLKDLEELEKQLDEQDQADLEAEEENSKNRAKGGVAGKKARRPVAPKNPKKVNKKDDP
QVPEASEISSTTAMEAENVPAVVKPKGRAGAKKKTKKQDDSDDDDDNDFDIPDLRERLAK
HNIDSSPDNSADMETELFQEPAGKKGPAKRAAATKKNPVISLSESIGEINISDGELEVVE
PAPAATKKGGRKPAAPKASKPPAAAKKRGPAAGKQQKLLTQMLKPAAEAEGSGISPEKKV
RKMRASPFNKKSGSVLGKTSGSSLSSMPEIDSDEDEEVAVVVEPRARPQRANRTKTTYVV
SDSETEEEVNDDSDFEED
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggttgcagattcgaagctcccgctgcaaagcagcaacaatgtaaacactaaagcctcc
aaaactatagaggaaacctaccaaaagaagacccaattagaacacatccttctccgaccc
gatacctacatcggttccattgaacagcacactcagcgcctatgggtgtacgagaacgat
gagatggtccaccgagacataaagtacgtcccgggactttacaagatcttcgacgagatc
ttagtcaatgccgccgataataaacaacgggatccatccatggattccattaaagtggtg
attgatgcggagcagaacttgatttcggtttacaataacggggatggagttcccgttgag
attcatcaggaggagaaggtttatgtcccggagttgattttcggccatttgttgactagc
agtaactatgacgacaatgttaaaaagacgaccggtgggagaaatgggtacggagctaag
cttacgaatatattttcgactgagtttgttatcgaaactgctgatggaaaacggcagaag
aagtataagcaggtatttaaaaacaatatgggaaacaaaactgagcctgttataacaaaa
tgtaaagagggcgagaattggacaagggttacatttaagccagacttggccaaatttaac
atgactcacctggaggatgatgtggttgcattgatgaggaagagggtgtttgatttagct
ggttgtcttggcaagaccgtgaaggttgagctgaatgggaaacgcattgccgtgaaatca
tttcttgattatgtcaacctttaccttagtgctgcctctaaaaataagagcgaacctctc
ccaaggatttctgagaaggttaatgcaagatgggaagtttgtgttagtctcagcgaaggg
cagtttcaacaggtcagctttgtcaatagtattgctacaatcaagggtggaacccatgtt
gactatgttaccaaccagatatctaattatgtgatgaatgctgtaaataagaagaacaag
aatgctaatgtcaaagcacataatgtgaagaatcatctgtgggtttttgtcaatgctctt
attgacaaccctgcttttgattcgcaaaccaaggaaactttgactcttcgtcagagcagt
ttcggctccaaatgtgaacttcctgaagattttttgaagaaagttgcgaagtctggagtt
gtggataatttgctccagtgggcagaattcaaacatagcaaagatcttaagaagactgat
ggaactaagtcaggtagtattcgaggaatccccaagctagatgatgctaatgaagctggg
ggacggaattcggacaaatgcacattgatattgacggaaggggattcagcaaaatctctt
gctgtggctggtctttctgttgtaggtcgaaaccactatggtgtttacccactgagaggt
aaactactgaatgtgagggaagccagccataagcagttaatggagaatgctgaaatacaa
aatcttaagcgaattcttggattgcagcagaacaaggagtatactgatgtcaaatctttg
agatatgggcatttgatgataatgactgatcaggatcatgatggttctcatatcaaaggg
ctgctgatcaattttattcattccttctggccttctttgctaaaagttaaatcattcatg
gttgagtttataactcctattgtgaaggctactcgcaaagtcaacaaacaggaggaggag
ttatgtttttatactatgcctgagtaccaagcttggaaggaaagtttggggaataatgca
aagagctggaaaataaagtactataaggggttgggaaccagcacgggacctgaagggaag
aaatacttcaaagatattgataagcacatgaaagagtttgtatgggaaggtgatagggat
ggtgatgcaatcgagcttgcttttagtaagaagaagatagaagcaaggaagaattggctg
cgacagtttgagccgggcacgcaccttgatcacaatgataaactcatcaattatagcgac
ttcattaataaggaacttattctgttttccatggctgatcttcaaagatcaattccttcc
atggttgatggcctgaagcctggtcaacggaagatccttttctgtgctttcaagaggaat
tttgtacatgaggcaaaggtttctcaattttcgggttatgtttcggagcattctgcttac
catcatggtgagcagagtctttgtagtaccattgttggaatggcccaggattttgtgggc
agtaacaacataaatcttcttcgtcctgggggtcaatttggtactcgtaaccagggtggc
aaagatgcagcaagtgcaaggtacatttttaccaatcttactaccattactcgatatctg
ttccgcaaggatgatgatggcctgctcgattacttgaatgaagatggccaatccattgag
ccttcctggtatgtacctgttataccaatggttctcgtgaacggaagtgaaggaattggg
acaggatggagctcttatatcccgaactataatccaagagatatagtggcaaatgtgagg
cgtttgctaaatggtgaaccaatggagcccatgcatccgtggtaccgaggtttcaaaggg
actattgagaaaaccgcatcaaaagaatctggtgttacctacaccataagtgggattgta
gaggaggttgatgagaccacactgaaaataactgaacttccaatccgtaggtggactcaa
gattataaggaatttttggaatccatcataacagcaaatgattcattcatcaaggaattt
aagcaatacagtgatgatagaactgtacattttgaggtcttcatgactgaagagaacatg
atgttggccaagcaagagggtttgatgaagaagtttaagctaacaacaactgttagcaca
agtaacatgcacttgtttgattcgagagggatgatcaagaaatatgacacccctgaggaa
atacttgacgaattttatcacttaaggctcgaattttacgagaaacgaaggaaacatatg
ttggacactcttgaactcgagttattgaaaatggataacaaagtcaggtttatccttgat
gttgttaaggggaacatcattgtgaacaataggaagagagctgacttgttccttgagcta
caagaaaaagggtttactccattcccgaagaaaacgaaagctgttgaagtagcagtggcg
ggggatattgatcatgaaggggaacctgaacttagccctgaagcaacaagggcaagtgat
tatgactatctgttatccatggcaatcggtactctgacccttgagaaggtccaagagctt
tgttctgatagggataaacttgagcatgaggttgaagagttgaggaaacacactccaaag
tctttatggctgaaagatcttgaagaactcgagaagcaactcgacgagcaagatcaagca
gacctggaagcagaagaagagaacagcaaaaacagagcgaagggaggtgtagctggcaag
aaggctcgaagaccagtggcacctaaaaacccgaagaaggtaaacaagaaagatgaccca
caagtacccgaagcctcagaaatttcgtctacgacagcaatggaagcagaaaatgttcct
gctgttgttaaacccaaaggccgggccggtgcaaagaagaagacaaagaagcaggatgat
agtgatgatgatgatgacaacgactttgatattcctgatctaagggagcgacttgccaag
cataacatcgattcctctcctgataattccgctgatatggaaactgaattgtttcaagaa
cctgctggaaagaaagggcctgccaaaagggcagctgctactaagaagaatcctgtcatt
tctctatccgagagcataggcgaaatcaacatcagcgatggagaattggaggttgtcgag
ccagctccagcagcaacaaagaaaggaggacgaaaaccggctgctccaaaagccagtaag
ccacctgcagcagcaaagaaaagaggtccagcagcaggcaagcaacaaaagcttttgaca
caaatgctgaaacccgcagcagaagctgagggttcagggatatcgcctgaaaagaaagtg
aggaaaatgagggcgtcaccgttcaacaagaaaagcggttcggtcttggggaagacgagc
ggttcttcactgtcttcaatgccggaaatcgatagcgatgaagatgaagaagtagctgtg
gttgtggaaccaagagctagaccacaaagggcaaaccggaccaagacaacttatgttgtt
agtgattccgagactgaggaagaagttaatgatgactcagatttcgaggaagattag
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integrated database retrieval system
