Gossypium hirsutum (upland cotton): 107934422
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Entry
107934422 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107934422
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
107934422
NCBI-ProteinID:
XP_016722338
UniProt:
A0A1U8M9Q5
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Position
D08:complement(61493053..61495450)
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AA seq
582 aa
AA seq
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MTDDALLKQLEESTKDFSRHQAETLRSILQHQRGVRYLQRHLPDAGDHNLPIDAATFRRS
VPLSCYDDYVDYINQLADGDKCTSDDDHDPRHLLSVDPLVCFFYSSGTSSMKPKLIPYFD
STLSKGASHIAHQGSAAVLRKFFPPRPEVNKRLVFIYADSITTTKGGFKVMAASSFPLHS
SSNPNRSLFMSLSSPMEVILGSNVEHQMYCHLLCGLRNSDSIDAIHVPYAIGLIKAMRVL
ESKWKQLCDDIEKGFLCSVINDVRMRDSVVEVLGGPQPDLSNRIRLIFEKKDWGGILNKL
WPNVRYIRSVTTGSMKQYHSKLKYYAGEVPLVGGDYFASECCVAINLDIKQPPDLTRFVM
LPTAAYFEFLPFDLAENNVVGEETVDVCGVEVGKMYEVVVTTYRGFYRYRLGDIVRVVGF
YNSSPLLEFVMRAPKTSYEIVTEGDLMAAMENFQLVLRNTMGMAIEIVEFTSSVDFGSSP
KRLKIFIEVKDCDMILQDKLQESNLRKCCSDLEDSLGSIYKVQRNKGEISPLSLSVLKCG
SFDRLLKLAIENGTPASQYKPPKIIRNPSIVDVLEENVIVTI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgacgcgttgttgaagcaactagaggaatcaacgaaggatttctctcgtcat
caggccgagactctacgctccatcctccaacaccaacgcggcgtgcgttatctccaacgc
cacctccccgatgccggagatcacaacctcccgatcgacgccgccacttttagacgctcc
gtgccgttatcttgctacgatgactacgttgattacatcaatcaattagccgacggagac
aagtgcaccagtgacgatgatcacgatcctcgccacctcttgtccgttgaccctctcgtt
tgcttcttttacagttctggaacgagttcaatgaagcctaaattgataccttactttgat
tcaacgctttcaaaaggggcgtcgcatatagctcatcaaggaagcgccgctgttcttcga
aagttttttcctccaaggcctgaagtgaataagaggctagtatttatatatgccgatagc
attacaaccacgaaagggggtttcaaggtaatggcagcttcttcattccctttgcatagt
agtagtaatccgaatcgctctctgtttatgtctctcagcagccccatggaagtgattctt
ggatcaaatgttgagcaccaaatgtactgtcaccttctctgtggtcttagaaattctgat
tctatagatgctattcatgtcccatatgccataggtttgattaaagctatgagggtctta
gaatccaagtggaagcaactatgtgatgatatcgaaaaagggttcctgtgttcggtgatt
aatgatgttcgaatgagggattctgttgttgaggttcttggtggaccacaaccagatttg
tcaaatagaattagattgatttttgaaaagaaggattggggtgggattttgaataaatta
tggccaaatgttcgatatattagaagtgtcacgaccgggagtatgaagcagtaccattcc
aagcttaagtactatgcaggggaggtacctctggtaggtggggattactttgcatcagag
tgttgcgtggccattaacttggatatcaagcaaccacctgatttgactagatttgttatg
cttccaaccgctgcatattttgagttccttccatttgatttagctgagaacaatgttgtt
ggtgaagaaactgtggatgtttgtggtgttgaagtagggaagatgtatgaagtagttgtg
actacttatagagggttttatagatatcgcctaggtgacattgtaagagttgttggtttc
tacaactcatctcccttgctggagtttgtgatgcgagctcctaaaacttcatatgagata
gtgactgagggagatctgatggctgccatggaaaattttcaacttgtactgagaaatact
atgggtatggcaatagagattgtggagtttacaagttccgttgacttcggttcaagtcct
aagagactgaagatctttattgaagttaaagactgtgatatgattttgcaggacaagttg
caggaatcaaaccttagaaaatgttgttcagatctcgaagacagtttaggaagtatttat
aaggtgcagaggaacaaaggtgagataagccctttatcactatcagttttgaaatgtggt
agctttgataggttactaaaactagcaatagagaatggaacaccagctagtcaatataag
ccacctaagattataagaaaccctagcattgttgatgttttggaagaaaatgttattgtg
actatataa
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