Gossypium hirsutum (upland cotton): 107934481
Help
Entry
107934481 CDS
T04793
Name
(RefSeq) heat stress transcription factor A-5-like isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107934481
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
107934481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7491
APG6_N
DUF3450
TMF_TATA_bd
EzrA
TolA_bind_tri
MSP7_C
PEP-utilisers_N
DUF4337
Csm1_N
Motif
Other DBs
NCBI-GeneID:
107934481
NCBI-ProteinID:
XP_016722411
UniProt:
A0A1U8M6H2
LinkDB
All DBs
Position
D02:2786000..2788600
Genome browser
AA seq
494 aa
AA seq
DB search
MDPTAPSASVVGGGGGGGGGPAPFLMKTFDMVDDSSTDDIVSWSSNKKSFVVWNPPDFAR
LLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQRHLLKNIHRRKPIHSHS
NPQGSLIDHERAGYEEEIEKLSREKAALEADVLRSEQERSALKHQVEELTQQADQMERRQ
DTLFNFLEKALQDPAFAEHLFRRIESMDDVVAYNKKRRLPQIDQTKPVGDHSLLDNKSSS
TPEFGNVVHLDFSNKLRLELSSAVSEINLVSQSTQSSNEDGESPQRRVSQGEPKDDNIRP
QGLLFTPETLDISDTGTSFTFNMDSSFSQRVSMNESPAVHSLQQRLSSNEEPDSHISCQL
NLTLASSSLQVNKSPSLTRMSQPSWEIGKVSESRSNANSKDSDSGPFHNSRNMIDGETTL
SSSKEGPNTNQEPAAAPVRVNDVFWEQFLTERPGSSDNEEASSNYRANPYEEQDDKRSGH
GLARNTKNIEQLSL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggacccaactgcaccctccgcgtcggtcgtcggcggcggtggcggcggcggaggaggg
ccggcacctttccttatgaaaacattcgacatggtggacgactcatcgaccgacgacatc
gtttcatggagctctaacaaaaagagctttgtggtttggaaccctcctgattttgctcgc
cttttgcttcccacttatttcaagcacaataatttctccagcttcatcaggcagcttaat
acctatgggttccggaagattgatcccgaacgatgggaatttgccaatgaagatttcgtg
aaagatcaaaggcatcttcttaagaatattcatcgaagaaaacctattcacagccatagt
aatccacagggttctttgatagatcatgaaagagctggatacgaagaagaaatcgaaaag
ctttcacgtgagaaagctgcacttgaggctgatgttttgaggtctgaacaagagcggtca
gctttgaagcatcaggtggaagagctgacacaacaagctgatcaaatggagcgtaggcaa
gacactttgtttaacttcttagaaaaggctttacaagaccctgctttcgccgaacatctt
tttcgtagaattgaatctatggatgatgttgtggcatataataagaaaaggagactgcct
caaattgatcaaaccaagccagttggtgaccatagtcttttggacaacaaaagtagttct
acacccgagtttggaaatgttgtccacctcgatttctcgaacaagcttagactagaattg
tcatcagctgtttcggagattaacttggtttctcaaagcacgcaaagttctaatgaagat
ggagaaagtccacagagaagggtttctcaaggagaaccaaaagatgataatatcagacct
caggggcttttattcacacccgaaacattagacatttctgatacaggcacatcttttaca
ttcaacatggattcatctttctctcaaagagtatcaatgaatgaaagcccggcagtgcat
tcactgcaacagagattaagttccaatgaagaacctgatagtcatatttcctgtcaatta
aatctaactctggcatcttcttcattgcaagtcaataaaagtcccagcttaactaggatg
tcccaaccaagttgggaaatcggaaaagtctccgagtcaaggtctaatgccaacagtaaa
gactctgattctggacctttccataatagcagaaacatgattgatggggaaacaacatta
tcgtcatcgaaagaaggccctaacacaaatcaggagcctgccgctgctccggttagagta
aatgatgtattctgggaacagttcctcaccgagagaccaggttcctctgacaatgaagag
gccagttccaattatcgagcaaatccatacgaagagcaagacgacaaaaggtcaggccat
ggactagcaaggaataccaagaacatcgagcagcttagtctttag
DBGET
integrated database retrieval system
