KEGG   Gossypium hirsutum (upland cotton): 107934553
Entry
107934553         CDS       T04793                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04145  Phagosome
ghi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107934553
   04145 Phagosome
    107934553
   04148 Efferocytosis
    107934553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107934553
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107934553
   04031 GTP-binding proteins [BR:ghi04031]
    107934553
Membrane trafficking [BR:ghi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    107934553
 Endosome - Lysosome transport
    107934553
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107934553
  Exosomal proteins of other body fluids (saliva and urine)
   107934553
  Exosomal proteins of colorectal cancer cells
   107934553
  Exosomal proteins of bladder cancer cells
   107934553
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    107934553
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase AAA_7 AAA_16 P-loop_TraG TniB
Other DBs
NCBI-GeneID: 107934553
NCBI-ProteinID: XP_016722494
UniProt: A0A1U8MAB5
LinkDB
Position
D10:complement(60601778..60606108)
AA seq 201 aa
MGCSSSLPDRSSGRSTGLNNADNPEGPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAGVAVIVYDITSPE
SFTKAQYWVKELQKHGSPGIVMALVGNKADLQEKREVPVQDGIDYAEKNGMFFIETSAKT
ADNINQLFEEIAKRLPRPSPS
NT seq 606 nt   +upstreamnt  +downstreamnt
atgggttgctcttcttctctcccagatcggagttccgggcggtccactggacttaacaac
gcggacaatcctgaaggtcccgatgccaaaaatctacgcgtaaagctggtcttgttaggt
gattctggagttggaaaaagttgtattgttcttcgctttgttcgtggccagtttgaccct
acatctaaggtaactgtaggagcttcattcttgtcacagacaatagctttgcaagattca
actactgttaagtttgaaatatgggacactgctggacaagagaggtatgctgcattggca
cctctctactacagaggagctggagttgcagttattgtgtatgatataactagtccagag
tccttcaccaaagcacaatattgggttaaggagctacaaaagcatgggagcccaggtata
gtgatggccttggttggtaataaagccgaccttcaggaaaagcgcgaagtaccagtccaa
gatggcattgactatgcagagaagaatgggatgttctttattgagacatctgccaagact
gcggacaatataaatcagttgtttgaggaaattgccaagcggctgccacgtccatcacct
tcatga

DBGET integrated database retrieval system