Gossypium hirsutum (upland cotton): 107934553
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Entry
107934553 CDS
T04793
Name
(RefSeq) ras-related protein RABF1
KO
K07887
Ras-related protein Rab-5A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
ghi04145
Phagosome
ghi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107934553
04145 Phagosome
107934553
04148 Efferocytosis
107934553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107934553
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107934553
04031 GTP-binding proteins [BR:
ghi04031
]
107934553
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
107934553
Endosome - Lysosome transport
107934553
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107934553
Exosomal proteins of other body fluids (saliva and urine)
107934553
Exosomal proteins of colorectal cancer cells
107934553
Exosomal proteins of bladder cancer cells
107934553
GTP-binding proteins [BR:
ghi04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
107934553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
ATPase
AAA_7
AAA_16
P-loop_TraG
TniB
Motif
Other DBs
NCBI-GeneID:
107934553
NCBI-ProteinID:
XP_016722494
UniProt:
A0A1U8MAB5
LinkDB
All DBs
Position
D10:complement(60601778..60606108)
Genome browser
AA seq
201 aa
AA seq
DB search
MGCSSSLPDRSSGRSTGLNNADNPEGPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAGVAVIVYDITSPE
SFTKAQYWVKELQKHGSPGIVMALVGNKADLQEKREVPVQDGIDYAEKNGMFFIETSAKT
ADNINQLFEEIAKRLPRPSPS
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcttcttctctcccagatcggagttccgggcggtccactggacttaacaac
gcggacaatcctgaaggtcccgatgccaaaaatctacgcgtaaagctggtcttgttaggt
gattctggagttggaaaaagttgtattgttcttcgctttgttcgtggccagtttgaccct
acatctaaggtaactgtaggagcttcattcttgtcacagacaatagctttgcaagattca
actactgttaagtttgaaatatgggacactgctggacaagagaggtatgctgcattggca
cctctctactacagaggagctggagttgcagttattgtgtatgatataactagtccagag
tccttcaccaaagcacaatattgggttaaggagctacaaaagcatgggagcccaggtata
gtgatggccttggttggtaataaagccgaccttcaggaaaagcgcgaagtaccagtccaa
gatggcattgactatgcagagaagaatgggatgttctttattgagacatctgccaagact
gcggacaatataaatcagttgtttgaggaaattgccaagcggctgccacgtccatcacct
tcatga
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