Gossypium hirsutum (upland cotton): 107934599
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Entry
107934599 CDS
T04793
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107934599
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107934599
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
Ig_TRAPPC9-Trs120_1st
Ig_TRAPPC9-Trs120_4th
TRAPPC13_C
Arrestin_C
Motif
Other DBs
NCBI-GeneID:
107934599
NCBI-ProteinID:
XP_016722560
UniProt:
A0A1U8M721
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All DBs
Position
D11:complement(71269458..71280544)
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AA seq
1285 aa
AA seq
DB search
MADPASTPLGKMLLEEITPVVMVLCTPYVEESCLKNGLSLIQLLSPFCDFTNIDVPVRTA
SDQPYRLRKFKLRLFYSSDIRQPNLEVAKERLKKVITHVGEKNFLESSDPSQVNNLLSRP
ESEMLPSWFQFFNKELVRTLSFSDHEAFDHPVACLLVVSSKDDEPVNRFVDLFNTNKLPS
LLNDGAMDPKIMKHYLLLHDNQDGPFNKATKLLADMRNAFGQNDCQIICFNSSQDGKIHH
QDNPWAPFKSDALPTENLGGFLNLDDLNEIKDFMQELSSKHIIPYMEQKIRVLNQQVSAT
RKGFRNQIKNLWWRKGKEDTIDTPNGPVYTFNSIESQIRILGDYAFMLGDYELALSNYRL
ISTDYKLDKAWKRYAGVQEMMGLTYFLLDQSRKDAEYCMENAFNTYLKLGSAGRRNTTRC
GLWWAEMLKTRDQLKEAATVYFRICGEDTLHSAVMLEQASFCYLLSKPPMLHKYGFHLVL
SGDHYKKCDQIKHAIRTYRSAIPVYKGTTWSLIKDHVHFHIGQWYALLGMYDVAVTHMLE
VLASTHQSKTTQELFLRDFLQIVQKTGKTFEVLKLQLPVINISSLKVIFEDQRTNASAAA
ARVKESLWRSLEEDIIPSSTARSNWLELQSKIMPRKYKESNICVAGEALKVDIEFKNPLQ
IPISVSSVSLMCELCANPEEDANSSNNEVQNNEDRTSTSSGDINSCLILSEVDFSLEGGE
TTVVQLTVTPRIEGILKIVGVKWKLSSAVVGLCNFEFNPVNRVVRGRRKQHSPSSDLKFL
VIKSLPRLQGFIHSLPEKTYAGDLWPLVLELSNQSKSPVKNLKMKISNPRFLYAGNQKEL
NADFPACLKKKMNVEKSGRHANVNKTLQNLYHFPEDISVQEETSLSWPLWFHAAVPGNIP
LYITIYYEMEGVSSIMKYRTLRMHYNLQVLPSLDVSFQLSTRPSRSQEFLLRMDVVNKTS
SECFQVHQLSSVGQQWEISLLQPVDSILPSQSLFAGQSLSCFFMLKDRRRSSTSEDSIPS
LSHIQSDVRLGPQDNSEAFFDVSSSPLADFHDCERSSRGMSSQGCEYKVDFVFITQLLKG
NSDSSSNTPLVFSHHACDCSPSSMSPISWLVDGPRTIQHNFSAPPCEVNLKMTITNSSDA
IASVHINTFDSPSSNNQLINDATTSQPPEHQSGWSEIPIVNDTKIITTEALTTRVPKSLS
LESVPQFIWSGTSSTKLVLQPRSTAEIPLQICVFTPGIYDLSNYILNWNLTPVNDGENQG
EANKSSGVCQGYPYYLSVLESNFKD
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccggccagcacgccacttggcaaaatgctattggaggagatcactcctgtt
gttatggtactctgtactccatacgtagaagaatcttgccttaagaacggtctttcctta
attcaattgctttcccctttctgcgacttcaccaacattgacgtgcctgtaaggacggcg
agtgatcaaccctacaggctgaggaagttcaaattgcgcttgttttactcctcagatatt
cgacaaccgaatctcgaggtagcaaaggagaggctaaagaaggttattacccatgtggga
gagaaaaattttctcgaatcttcagacccatctcaagttaacaatcttctctctaggcct
gagtctgaaatgttaccatcgtggtttcagttttttaacaaagagcttgtacgtaccttg
tctttttcagatcatgaagcttttgaccatcctgtggcatgccttttggttgtgtcgtcg
aaggatgatgaacccgtaaacagatttgtagacctctttaacaccaacaaattgccttct
cttctcaatgacggtgcaatggacccaaagataatgaagcattacttacttttgcacgat
aatcaagatggccctttcaataaggctactaaacttttggcagacatgagaaatgcattt
ggacaaaatgactgtcaaataatttgctttaactcttctcaagatgggaaaatccatcat
caagataatccttgggctccatttaaatctgatgctttacctactgaaaatcttggtggt
ttcctcaatcttgatgacttaaacgagataaaggattttatgcaagaattatcatctaaa
catatcattccttacatggaacaaaagatacgtgtgttgaaccaacaggtttctgctaca
aggaaaggttttaggaaccaaattaaaaatttgtggtggaggaaggggaaagaagataca
atagacacccctaatggtcctgtgtatacctttaattcaattgaatcccagattagaatc
ttaggtgactatgcattcatgttaggagactatgaacttgcactatcgaattatcgccta
atttccaccgattacaagctcgataaagcctggaagcgctatgctggtgtgcaggagatg
atggggcttacatacttcttgcttgatcaatcaagaaaagacgcagagtactgcatggaa
aatgcatttaatacttatttaaaacttggatcagctggccgacgaaatactactagatgt
ggtctctggtgggcagagatgctcaagacaagagatcagcttaaagaagctgctactgtt
tattttcgcatttgtggtgaggatactttacattcggctgtgatgcttgagcaagcatct
ttttgctacttgttatcaaaaccaccaatgttgcataaatatgggtttcatcttgttctc
tctggtgatcattacaaaaaatgtgatcagattaaacatgcaattcgcacatatagaagt
gctattcctgtttataagggaaccacttggagtctcatcaaagatcacgttcatttccac
attggacagtggtatgctttacttggcatgtatgatgttgctgtcactcatatgttggag
gtcttggccagcactcatcagtcaaagacaacgcaggagctctttctgagagattttctt
cagattgtccagaaaactgggaagacatttgaggtgctcaaacttcagttgcctgttatc
aacatttcctcccttaaggtcatttttgaagatcagagaactaatgcatctgctgcagct
gctagagtcaaagaaagtttatggcgttcactggaggaggacataatcccatcgtctact
gccaggtccaattggctggaattacagtcaaagattatgccaagaaagtataaagaatca
aatatttgtgtggcaggagaagcattaaaagtggatattgaatttaaaaaccctctacaa
atccctatttctgtctcaagtgtttctttgatgtgtgagctctgtgcaaatcctgaagaa
gatgctaatagttcgaacaatgaggtccaaaataatgaagacagaacatcaacctcctct
ggggatattaactcatgtttgattttatctgaggttgacttttccttagaagggggtgaa
acaactgtggtgcaactaactgttactccaagaatagaaggcattctgaaaattgttggt
gtgaaatggaaattgtcaagtgcagtggtgggtttatgtaattttgagtttaaccctgtg
aacagagttgtcaggggaagaaggaaacagcattctcctagcagtgacttgaagtttcta
gtgattaagagtctacccagacttcagggttttattcattctttaccagaaaaaacctat
gcgggagacttatggcctcttgtgttggaactaagtaaccaatcaaaatctcctgtcaag
aacctaaagatgaagatcagcaatcctagatttctatatgctgggaaccaaaaggagttg
aatgcagactttcctgcatgcttaaaaaagaagatgaatgttgagaaaagcggcaggcat
gctaatgttaataaaacattgcagaatttgtatcactttcctgaggacatatccgtgcag
gaggaaacatcattatcatggcctctttggtttcacgctgctgttcctggaaatattcct
ttgtacattacaatatattacgaaatggaaggtgtatcaagcatcatgaaatatcgcact
ctacgcatgcattataatttgcaggttttaccttcattggatgtatcgtttcaacttagt
actcgcccatcaagatcgcaagagttcctcttgcgcatggatgttgtcaacaagacgagt
tccgaatgtttccaggttcatcagttgtcgtctgttgggcagcaatgggaaatctcattg
cttcaacctgttgatagcatcttaccttctcagtctttatttgctggccagtcactttcg
tgtttcttcatgcttaaggatcgcaggaggtcatcaacttctgaagatagtattccttct
ctttcacatattcaaagtgacgtaaggttgggccctcaggataacagtgaagccttcttt
gatgtatcgagttcacctttggccgatttccatgactgtgaaagatcatcccggggaatg
tcatctcaggggtgtgaatataaagttgatttcgtgttcatcactcaactgctgaagggt
aatagtgattccagttctaatacaccacttgtgttttcccatcatgcttgtgattgcagt
ccttctagcatgagtccgatatcatggttagtagacggacctcgaaccattcaacataac
ttctcggctcctccatgtgaagtaaacttgaagatgactataaccaactcatccgatgcc
attgcatctgtccatatcaacacctttgattcccccagtagtaacaaccaactgatcaac
gatgccaccacatctcagcctccagaacaccaatcagggtggtcagaaattcccatcgtg
aacgatacaaagatcatcacaactgaagccctcacaacccgtgttcccaaatcattatcc
ctcgaaagtgtcccccaattcatttggtcaggcacaagctccactaaactcgtacttcaa
cctcggtcaactgctgaaatccctcttcagatttgtgttttcactcccgggatatacgac
ttatcaaactacatcttaaattggaaccttacgcccgttaacgatggagaaaaccaagga
gaagcaaacaagtcatccggagtttgccaaggatatccgtattacctatccgtgctcgaa
tctaattttaaagattag
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integrated database retrieval system
