Gossypium hirsutum (upland cotton): 107934601
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Entry
107934601 CDS
T04793
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107934601
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107934601
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107934601
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
107934601
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107934601
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107934601
Prokaryotic type
107934601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF2046
Motif
Other DBs
NCBI-GeneID:
107934601
NCBI-ProteinID:
XP_016722567
UniProt:
A0A1U8M6X2
LinkDB
All DBs
Position
A10:118134361..118148770
Genome browser
AA seq
1016 aa
AA seq
DB search
MSLHQIAVSHSFLLSSRSAYTLNPLLFSKRNRFRISLSHSRFTSIKHRSFAVAVSDNGIF
TSPELAKSFDFTSEERIYNWWLSQGYFRPKFDWESDPFVISMPPPNVTGSLHMGHAMFVT
LEDIMVRYHRMRGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFEKRVWEWK
EKYGGTITNQIKRLGASCDWTRECFTLDEQLSRAVIEAFIRLHEKGLIYQGSYMVNWSPK
LQTAVSDLEVEYSEEPGTLYYIKYRVAGGSRSDFLTIATTRPETLFGDVAIAVHPQDERY
SKYVGKMAIVPMTYGRHVPIISDKYVDKDFGTGVLKISPGHDHNDYVLARKLGLPILNVM
NKDGTLNEVAGLYCGLDRFEARKKLWSDLEETDLAVKKEPHSLRVPRSQRGGEVIEPLVS
KQWFVTMQPLAEKALLAVEKGELTIIPERYGKIYNHWLTNIKDWCISRQLWWGHRIPVWY
IVGKDCEEEYIVARSAEEALRKARDKYGKDVEVYQDPDVLDTWFSSALWPFSTLGWPDEL
AEDFKRFYPTTMLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSQGHKMSKT
LGNVIDPLDTIKEYGTDALRFTLALGTAGQDLNLSTERLTANKAFTNKLWNAGKFVLQVL
PNRDNVSGWQNIEACKFNTEGYLLRLPLPECWVVSKLHMLIDAVTESYNKFFFGDVGREI
YDFFWGDFADWYIEASKARLYHSGDDSVVLVAQTVLLYVFENILKLLHPFMPFVTEELWQ
ALPNRREALIISSWPQTSLPRSTDLVKRFENLQALTRAIRNARAEYSVEPAKRITASIVG
SEEVIQYISEEKEVLALLSKLDLDNIHFADSPPEDAKQSVHVIASEGLEAYLPLADMVDI
SAEVLRLTKRLSKMQTEYEGLKARLNSPKFIEKAPNDVVRGVQEKAAEAEEKINLTKNRL
AFLKSTVMLSCSAHSTFRGLCSFLLLEAYYTQSSALITSPERNWLGQIRRLEQSIN
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcaccaaatagctgtctctcattcttttcttttatcttctcgctctgcttat
actctcaatcctcttttgttctcaaaacgaaaccgttttcgcatttccctctctcactct
cgtttcacttcgataaaacataggagctttgctgtggctgtatcagacaacggcattttc
acttctccagagttggcaaagtcgtttgattttacttcggaagaacgaatatacaattgg
tggctgtctcaaggatatttcagaccaaaatttgactgggaaagtgatccttttgtcata
tcaatgccacctcctaatgttactggctctctgcacatgggacatgcaatgtttgtaact
cttgaggatatcatggttaggtaccatcgcatgaggggaagaccaacactttggcttcct
ggaactgatcatgctggtattgcaactcagttggttgtggaaagaatgttggcttctgaa
ggaataaaaagggtagaactgggcagagatgaatttgaaaaacgagtttgggagtggaaa
gagaagtatggtgggaccattactaatcagattaagagacttggggcttcttgtgactgg
actagagaatgtttcacccttgatgagcagctaagtcgagccgttatagaggcgtttatt
agacttcacgaaaaaggattaatttatcaagggtcttacatggttaactggtctccaaag
ttacagactgctgtttcagacttggaagtagaatactctgaagagcctggtaccctctac
tatattaaatatcgtgttgctggaggttcaagaagtgatttcttaacaatagcaacaaca
cggcctgaaactttgtttggtgatgtagctatagctgtgcatcctcaggatgagcgatat
tccaagtatgttgggaaaatggcaattgtccctatgacatatggtcgtcatgttcctatc
atctctgataagtatgttgataaagactttgggactggtgtactgaagataagccctgga
catgatcataatgattatgttctagctagaaagcttggccttcctattcttaatgttatg
aacaaggacgggacattaaatgaggttgctggactgtactgtggccttgatcgatttgag
gcacggaagaaattgtggtctgatcttgaggagactgacttagctgtgaaaaaggaaccc
cacagtttaagagtaccgagatctcagcgtggcggagaggtaatagagccactagtaagc
aagcagtggtttgtaacaatgcagcccttagctgaaaaggctcttcttgcagttgaaaag
ggagaattgaccattattcctgaaagatatgggaagatttataatcattggctgacaaat
atcaaggattggtgcataagcagacagctgtggtggggacaccgcatacctgtttggtac
attgttggaaaagactgtgaagaggaatatatagttgctaggagtgctgaggaagctctt
aggaaggctcgtgataaatacggaaaagacgtagaagtttatcaggatccagatgttctc
gacacttggttctcaagtgcattatggcctttcagtactcttgggtggccagatgagttg
gcagaggattttaaaaggttttatccgacaacaatgcttgaaactggccatgatatattg
ttcttttgggttgcaagaatggtcatgatgggaatcgaattcacaggaactgttccattt
tcatatgtttatcttcatggtctaatccgtgattcacaagggcataaaatgtctaaaact
cttggcaatgttattgacccacttgatactatcaaggagtatggcactgatgcgttgcga
ttcactcttgctttgggaactgctggtcaggatcttaatttatctactgaaaggctaaca
gcgaacaaggccttcacaaacaaattatggaatgctggcaagtttgtgctgcaggttctg
cctaatcgggacaatgtttctggttggcagaatatagaggcttgtaagtttaacacggag
gggtatcttctaaggcttcctcttccagaatgttgggtggtctcaaaactgcatatgctt
attgatgctgtcactgagagttataacaaatttttctttggggacgttgggagagaaata
tatgatttcttttggggtgattttgccgactggtatattgaagccagtaaagctcgcctt
taccactctggagatgattcagttgttttagtagctcagacagttctactctacgttttc
gagaatatactgaaattattacatccattcatgccattcgtaactgaggaactgtggcag
gcacttcccaatcggagagaagctcttataatatcttcctggccacaaacttctcttccc
aggagtactgatttggtaaaaagatttgaaaatttacaagctctgactcgagcaatccgt
aatgctagagccgagtattctgttgagccagcaaagcgcataactgcttctattgttggt
agtgaagaagtcattcagtatatatctgaagagaaggaggtgttggctctcttatccaag
ctagatttagacaatattcatttcgctgattctcctccagaggatgcaaaacaatcagtt
cacgttattgcaagtgaaggactggaggcatatcttccccttgctgatatggttgatatt
tctgctgaagtgctacgccttaccaagcgcctatcaaagatgcaaacggagtatgaggga
cttaaagctcgcctcaactctcctaaattcatagagaaagctcccaatgatgttgtccgt
ggggttcaggaaaaagcagcagaagcagaagagaagattaatctgaccaaaaaccgattg
gctttcctgaaatcaactgttatgctttcctgttctgcacattcaaccttcagaggactt
tgcagttttctgttgttagaagcatattatacccaaagctccgcactgataacgagccca
gaacgcaactggcttggtcagataagaaggttagagcaatccataaattga
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