Gossypium hirsutum (upland cotton): 107934873
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Entry
107934873 CDS
T04793
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107934873
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107934873
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107934873
NCBI-ProteinID:
XP_016722882
UniProt:
A0A1U8M7U4
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Position
A04:complement(89130928..89132847)
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AA seq
440 aa
AA seq
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MDAAGNRSFKLLLFLFAAIIPALQGHIGEYDEYWKQRELEAKENTEQAYNPNPEEVTQHV
NHLVSRSLMGLNSTRRHLRARKKGGPCDPTNPIDQCWRCDRNWEKNRQRLADCAIGFARG
TIGGKYGRIYVVTDPSDDDFLNPKPGTLRHAVIQKEPLWIIFARAMIIRLKEELIMSGNK
TIDARGANVHVAYGAGITIQYVRNVIIHGLHIHHIVPGNGGMIRDSVNHYGFRTKSDGDG
ISLFGATNVWLDHLSMYKCRDGLIDAIQGSTAITISNCHFTHHDQVMLFGANDNHKMDEK
MQITLVFNHFGKGLVQRMPRCRWGFIHVVNNDYTHWLMYAIGGSSHPTVISQGNRYIARP
HVASKEVTKRDYAPPEVWKTWNWRSEGDLLLNGAFFSQSGDPKASSKFKGDTKVSAKPAY
KVDLLTKDSGTLICIRGRAC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgctggcaatcgaagttttaagttactattatttttatttgctgccataatc
ccagccctgcaaggtcacatcggagaatatgatgaatattggaaacaacgtgaattggaa
gctaaagaaaacaccgagcaggcatataaccccaatcctgaggaagttacccagcatgtc
aaccaccttgtttccaggtcgctgatggggctaaatagtacaagacgacatttgagagca
agaaaaaaaggcggtccctgcgatccaaccaaccccattgaccagtgctggcgctgtgat
cgtaactgggagaaaaacaggcagagactggctgattgcgccattggattcgcacgtggt
actattggtggaaagtacggaagaatttacgtagtgaccgatccttcagatgatgatttt
ttaaatcctaaacctggaaccctacgtcatgctgtgatccagaaggaacctctttggatc
atctttgcacgagctatgatcatcaggctaaaagaggagctcattatgtcgggtaacaaa
acaatcgacgctaggggagccaatgtgcatgtggcttatggggctggtattactatccag
tatgtgaggaacgttattatccatggcctccatattcaccacattgttcccggcaatggc
ggcatgatcagggattccgtaaaccactatgggttcaggacaaagagcgatggtgatggg
atttctctttttggagcaacgaacgtttggcttgatcacctttcaatgtataagtgtagg
gatggtctcattgatgccattcaggggtcaactgccataacaatctccaactgccatttc
actcatcacgaccaggtgatgttgtttggagcaaatgacaaccacaaaatggatgagaag
atgcagatcactcttgttttcaaccacttcggtaaaggattggtacaaaggatgccgagg
tgtcgatgggggtttatccatgtggtcaacaatgactatactcattggctcatgtatgcc
attggaggtagtagccaccctaccgtcatcagccaaggcaaccgatatattgctcgacct
cacgtggcatctaaggaggtgaccaagagggactatgcaccaccagaagtatggaagacg
tggaattggagatcagaaggggacctgctgctgaatggggcttttttctctcaatccggt
gatccaaaagccagctcgaaattcaaaggcgacactaaggtttctgctaagcctgcttat
aaggtggacttacttacaaaagattctggaacacttatatgtatccgtggccgagcttgc
taa
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