Gossypium hirsutum (upland cotton): 107934905
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Entry
107934905 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: ARF guanine-nucleotide exchange factor GNOM
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107934905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107934905
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
107934905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Motif
Other DBs
NCBI-GeneID:
107934905
NCBI-ProteinID:
XP_016722910
UniProt:
A0A1U8M7X1
LinkDB
All DBs
Position
D04:58104710..58111574
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AA seq
1463 aa
AA seq
DB search
MGRLKLQSGIKAIEEEPEDYDMTYSNKTTLACMINSEIGAVLAVMRRNVRWGGRYMSSDD
QLEHSLIQSLKALRKQIFLWQNQWHTINPAAYLQPFLDVIQSDETGAPITGVALSSVHKI
LTLDVIDQNTANVEEAMRLVVDSVTSCRFEVTDQASEEVVLMKILHVLLACMKSKASVML
SNQHVCTXVNTCFRIVHQAEKKAELLQRIARHTMHELVRCIFSHLLNVENTKHALVNRSG
TAKLELGAIDNDYAFGANXAENGNGSEYDDQASSASFASNSVGLVVTVREESMAVAGNGK
ETVPYDSLLMTEPYGVPCMVEIFHFLCTLLNTVEHVGMDPRSNTLTFDEDVPLFALGLIN
SAIELGGXSFRRHPRLLSLIQDELFRNLMQFGLSMSPLILSMVCSIVLNLYHHLRTELKL
QLEAFFSCVILRLAQGKYGASYQQQEXAMEALVDFCRQKTFMVEMYANLDCDITCRNVFE
DLANLLSKSAFPVNCPLSAMHILALDXLIAVIQGMAERIGNGSVSSEQPRYSEEYLPFWM
VKCDNYADPVHWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVA
CFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGES
QKIQRVLEAFSERYYEQSPQILANKDAALLLSYSLIMLNTDQHNVQVKKKMTEEDFIRNN
RHINGGNDLPRDFLSELYRSICKNEIRTXPEQGFGYPEMTPSRWIDLMHKSKKTAPFIVA
DSRAYLDHDMXAIMSGPTIAAISVVFDHAEHEDVYQTCIDGFLAVAKISACHHLEDVLDD
LVVSLCKFTTLLNPSSVEEPVLAFGDDXKARMATVTVFTIANRYGDYIRTGWRNILDCIL
RLHKLGLLPARVASDAADESELSADPGHGKPIXNSLSSAHLQSIGTPRRSSGLMGRFSQL
LSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGQ
PQKGSSSPEDEDTAVFCLELLIAITLNNRDRIVLLWQGVYEHIANIVQSTVMPCALVEKA
VFGLLRICQRLLPYKENLADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANATHIR
SQMGWRTITSLLSITARHPEASEAXFDALLFIMSDGAHLXPANYVLCIDAARQFAESRVG
QAERSARALDLMSGSVDCLARWTREAKEAMGEDDAGKMSQDIGDLWLRLVQGLRKVCLDQ
REEVRNHALLSLQKCLTGVDGIHISHGLWLQCFDLVIFTMLDDLLEIAQGHQKDYRNMEG
TLILATKLLSKVFLQLLHELSQLTTFCKLWLGVLSRMEKYMKVKVRGKKSEKLQELVLEL
LKNILLVMKTRGILMQRSALGGDSLWELTWLHVNNIAPSLQSEVFPDQGPELKHGETGCA
VSGETVSVPSNETTTLEGAGAGS
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggggcgactcaagctgcaatctgggatcaaggcaattgaggaagaacctgaagactat
gatatgacatattctaacaaaactactttagcatgtatgattaattctgaaataggtgct
gtattagctgtcatgaggagaaatgtaagatggggtggtcgatacatgtcgagtgacgat
cagctagaacactctttaattcagtcattgaaggcattaagaaagcaaatatttttgtgg
cagaatcagtggcataccatcaaccctgctgcgtatctccagccttttttggatgtgatt
caatctgatgaaactggtgcaccaatcactggtgtcgctctatcatctgttcataaaatt
ttaacccttgatgtaattgatcaaaatactgcaaatgttgaagaagctatgcgtttggta
gttgattctgtgactagctgccgatttgaggtgacagatcaagcatcagaggaagtggta
ctgatgaagatacttcacgttcttcttgcttgcatgaaaagtaaagcctcagttatgttg
agtaatcagcatgtttgcacanatgttaacacttgctttcgaatagttcaccaagcagag
aagaaagctgaattgttgcagcggatagcccgccacacaatgcacgaacttgttaggtgt
atattttcacaccttttgaatgttgagaacacaaagcatgcgttggttaacagaagtggc
actgctaaactagagcttggtgcaatagataacgattatgcatttggggctaacnaagca
gaaaatggaaatggctctgagtatgatgatcaagcatcttctgcaagttttgcatccaat
tctgtaggtctggtagtaactgtgagggaagaaagtatggcagtagctggtaatggaaag
gagacagtcccatatgattcgctcctcatgacagagccatatggtgtcccttgcatggtg
gagatatttcatttcttgtgtactttactaaatactgttgagcatgtgggaatggatccg
cgctcaaataccctgacatttgatgaagatgtgccactttttgccttgggcttaattaac
tctgccatagaattggggggcncttcctttcgtcgtcacccaaggctattgagcttgatt
caggatgaattatttcgtaatctgatgcaatttgggttgtcaatgagtccacttattctt
tcaatggtgtgtagtattgttctaaatctttatcaccatctgcgtacagaactcaaacta
caactcgaggctttcttttcctgtgtaattctgaggcttgcacaaggaaaatatggagct
tcataccagcagcaggagngtgccatggaagctctagttgatttctgcaggcagaaaaca
tttatggtggagatgtatgccaatttagattgtgacataacttgccgcaatgtgtttgaa
gaccttgctaatttgttgtcaaagagtgcattccctgtgaactgccctttgtctgcgatg
cacattcttgccttggatngtttaattgctgttatccagggaatggctgagaggatcggg
aatggttcggttagttcagagcagccccgttattctgaggaatatctgccattctggatg
gtgaagtgtgataactatgctgatccagttcattgggttccatttgtcaggcggagaaaa
tacatcaagagaaggttgatgattggagctgatcacttcaaccgtgacccaaaaaaaggg
ctagagttcctacaaggaacacatcttctgcctgacaaacttgacccccaaagtgtggct
tgctttttcaggtacactgctggattagataagaatcttgttggggatttcctaggaaat
catgatgagttctgtgttcaggttcttcatgaatttgctgggacttttgatttccaagat
atgaatctggatactgcactaagactgttcctggaaacttttcgattgcctggagaatcg
caaaagatacaaagggtgctggaggcattctctgagaggtactatgagcaatcgccacag
attctagctaacaaggatgctgctttgctattatcatattcacttataatgcttaacact
gaccagcacaatgtccaagtaaagaaaaagatgacagaggaggatttcatccggaataat
cggcatataaatggaggcaatgatcttcctcgagattttttgtcagaactataccgctca
atatgcaagaatgagatccgcacanacccagaacaaggctttggctatcctgaaatgacc
cctagtcggtggatagatctaatgcacaagtctaagaaaactgcaccgttcattgtagct
gattctagagcataccttgaccatgatatgnttgcaataatgtcaggtccaacaattgct
gctatctctgttgtatttgatcatgctgaacatgaagatgtttaccagacctgtattgat
ggattcttagctgttgcaaagatttcagcatgccatcatcttgaagatgtactggatgac
ctagttgtgtctctctgcaagtttacgactcttttgaatccatcatctgttgaggaacca
gtgttggctttcggtgatgatngcaaagccaggatggcaactgtaactgtttttactatt
gcaaatagatatggtgattacattcgtacaggttggaggaatatactggattgtatcttg
cgactgcacaagctggggcttcttccagctcgcgtagctagtgatgcagctgatgagtca
gagctctctgcagaccctggtcatggaaagcccattnacaattctttatcttcagctcac
ttacagtccataggaaccccccgtagatcctctggattgatgggccggttcagtcagctt
ttatcccttgatacagaggagccaagatcacagcccactgagcaacaacttgctgctcat
caacgcacccttcagacaattcaaaaatgccatattgacagcatatttactgaaagtaag
tttttgcaagctgaatctttgttgcagctagcacgggccctaatttgggctgcagggcag
ccccagaaagggagcagctcacctgaggatgaagacactgcagttttctgcctggagttg
cttattgcaattaccttgaacaaccgtgataggattgtgcttctatggcagggtgtctat
gagcacatagctaatattgttcaatcaactgttatgccttgtgcgctggtagagaaggca
gtttttgggcttcttagaatttgccaaaggctgcttccttacaaagagaacctggctgat
gaactcttgaggtccctgcaacttgtcttgaagcttgatgctcgagtggctgatgcatac
tgtgagcaaattacacaggaagtaagtcgcttagtgaaggcaaatgctacacatatcaga
tctcaaatggggtggcgtacaataacatctttactatccatcacagcccggcatccagaa
gcatctgaagcanggtttgatgcgcttttatttattatgtctgatggggctcacttgnct
ccagccaattatgttctctgcatagatgctgcgaggcagtttgccgagtctcgtgttgga
caggcagagcgatctgcacgtgcactggatcttatgtccggttcagttgattgtttggca
aggtggacccgtgaggctaaggaagcaatgggagaggatgatgctggtaagatgtctcag
gatattggtgatttatggttgaggcttgtgcagggactcagaaaagtttgtttggaccag
agagaagaggtcagaaaccatgctcttctatcattgcagaagtgcttgactggagtagat
gggatccacatttctcatggtttatggttgcagtgtttcgatcttgtgatcttcacaatg
ctcgatgacttgcttgaaattgctcagggacaccaaaaagactaccgaaacatggaaggc
acacttattcttgccacaaagctcctttccaaagtgttcttacagctgctccatgagctc
tctcagttaactacattttgcaaactgtggctcggtgtactcagccgaatggaaaaatat
atgaaagtaaaagtccgaggtaagaaaagtgagaagcttcaggagcttgtgctcgagctt
ctcaagaacatcttgcttgtaatgaagacaagaggaatactcatgcagaggagtgcacta
ggtggagatagcttgtgggaactgacatggctgcatgtgaataacattgcgccatctttg
cagtcggaggttttccctgatcagggtccagagctcaagcatggcgaaaccggttgtgca
gtttctggtgaaacagtttctgttccttcaaatgaaacaaccacccttgaaggggctggt
gcgggaagttaa
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integrated database retrieval system
