Gossypium hirsutum (upland cotton): 107935020
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Entry
107935020 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107935020
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107935020
NCBI-ProteinID:
XP_016723037
UniProt:
A0A1U8M892
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Position
A03:complement(110775255..110777623)
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AA seq
598 aa
AA seq
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MAVDSAISSPLGPPACEKDAKALRFIEEMTRNADSVQERVLSDILTQNSQTEYLRRFKLN
RATDRDSFKSKLPVIAYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPT
IKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSE
HFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLQDRHQVLRVGAVFASGLLRAIRF
LQLNWRQLSQDIETGTLNQKVTDPSLRECMGKILKPDPELARFVRHECSKESWEGIITRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPKACTMYASSECYFGLNLNPMCKPSEVSYTI
MPNMAYFEFLPHDPNSAGFTRDSPPKLVDLVDVEIGKEYELVITTYAGLCRYRVGDILRV
TGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASRLLREFNTSVVEYTSYADTK
TIPGHYVIYWELLVKDAANSPTDDVLKQCCLAMEESMNSVYRQGRVADNSIGPLEIRVVK
NGTFEELMDYAISRGASINQYKVPRCVNFTPIVELLDSRVVSTHFSPALPHWTPERRR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgattccgcaatctcgtctccgttgggtccgccggcatgcgagaaagatgca
aaagctttgcgattcatcgaggaaatgactcggaacgccgactcggttcaagaacgagtt
ttgtccgatatcctaactcaaaactcccaaaccgagtaccttcgaaggttcaaactcaat
agggcaaccgatcgtgactcgttcaaatccaaacttccggtcattgcttacgaagacctt
cagcctgaaatccaacgcatcgctaatggtgaccgttccgccattttatcagctcaccca
atctcagaattcctcaccagctccgggacttcagctggtgagaggaaactgatgccaact
attaaagaagagctagatcgccgccagttgctctacagtttgctcatgccagtgatgaat
ctttatgtgccgggtttagacaaaggcaagggcttatatttcttgttcgtcaaatcggaa
acaagaaccccaggtggtctgttagctcgaccggtgctgaccagttactacaagagcgag
catttcaagacccgaccgtacgacccatacaacgtttacaccagccccaacgaagccatc
ctttgtcctgattccttccaaagcatgtatacacagatgctttgtggtctccaagaccgc
catcaagtcctccgtgtcggcgcggtgttcgcctccggtctcctccgtgcaatcaggttt
cttcagcttaattggcgacaactctctcaggatatcgaaacgggtaccttgaatcaaaag
gtaaccgacccgtcattaagggaatgtatgggtaagatcctgaaacccgacccggaacta
gctcggtttgtccgccatgaatgttcgaaggaaagctgggaagggattattacaaggatt
tggcctaatactaagtacctcgacgttatagtaacgggtgctatggcacagtatattccg
accttggattattacagtggtgggttacctaaggcatgtacaatgtacgcttcatcggaa
tgttattttgggttaaaccttaaccccatgtgcaaaccatcggaagtttcgtatactatc
atgccgaacatggcgtatttcgagttcttacctcatgatcctaactcagctgggttcact
cgtgactcacctcctaaactcgttgaccttgttgacgtggaaatcgggaaagaatacgag
ctcgtaatcacgacctatgccggattatgcaggtaccgagtcggcgacattttacgagtc
acggggttccataactcagccccacagttccatttcgtgaggaggaagaacgtgttgctc
agcatcgactcggacaaaaccgacgaagccgagttacaaaaagccgtcgagaacgcttct
cggctcctccgagaattcaacaccagcgtcgtcgagtacacgagttacgccgacaccaaa
accatccccggccactacgttatatactgggaattgttggtgaaagacgccgcgaactcc
cccaccgacgatgttttgaaacagtgctgtttagcaatggaagaatcgatgaactcggtg
taccgacaaggccgagttgctgacaactcaatcggcccactcgaaatccgggtggtgaaa
aacggcacgtttgaagaactcatggattacgccatatcaagaggagcttccattaatcaa
tacaaggttccaaggtgtgttaacttcacacccatcgtggagttactggactctagagtg
gtatctacacattttagcccagctttaccacattggacccctgaaaggcgaagatga
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